Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12550

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,697,156	-		RR42_RS12545	0.47	-0.9
2,697,167	-		RR42_RS12545	0.48	+0.5
2,697,167	-		RR42_RS12545	0.48	-1.4
2,697,182	-		RR42_RS12545	0.49	-2.1
2,697,182	-		RR42_RS12545	0.49	-0.5
2,697,182	-		RR42_RS12545	0.49	-1.1
2,697,257	-		RR42_RS12545	0.55	-0.1
2,697,257	-		RR42_RS12545	0.55	-0.6
2,697,306	-		RR42_RS12545	0.59	+0.6
2,697,374	-		RR42_RS12545	0.65	+0.1
2,697,374	-		RR42_RS12545	0.65	-0.5
2,697,374	-		RR42_RS12545	0.65	-0.8
2,697,374	-		RR42_RS12545	0.65	+1.5
2,697,374	-		RR42_RS12545	0.65	+0.6
2,697,374	-		RR42_RS12545	0.65	-0.3
2,697,374	-		RR42_RS12545	0.65	-0.2
2,697,374	-		RR42_RS12545	0.65	+0.5
2,697,425	-		RR42_RS12545	0.69	+0.5
2,697,515	-		RR42_RS12545	0.76	+0.2
2,697,515	-		RR42_RS12545	0.76	-0.2
2,697,515	-		RR42_RS12545	0.76	+0.1
2,697,515	-		RR42_RS12545	0.76	+0.4
2,697,515	-		RR42_RS12545	0.76	+0.5
2,697,515	-		RR42_RS12545	0.76	-0.1
2,697,560	-		RR42_RS12545	0.80	+1.2
2,697,958	-				-0.6
2,698,054	-				+0.2
2,698,116	+				+0.5
2,698,202	+		RR42_RS12550	0.19	-0.9
2,698,443	+		RR42_RS12550	0.83	-0.9
2,698,443	+		RR42_RS12550	0.83	-1.1
2,698,444	-		RR42_RS12550	0.83	+0.9
2,698,546	+				+0.1
2,698,547	-				+0.7
2,698,547	-				-1.4
2,698,649	+				+0.3
2,698,649	+				-0.2
2,698,650	-				-2.3
2,698,650	-				+0.9
2,698,650	-				+0.8
2,698,756	+		RR42_RS12555	0.22	+0.4
2,698,756	+		RR42_RS12555	0.22	+0.0
2,698,757	-		RR42_RS12555	0.22	+0.9
2,698,757	-		RR42_RS12555	0.22	-0.2
2,698,757	-		RR42_RS12555	0.22	+0.4
2,698,762	+		RR42_RS12555	0.23	+0.1
2,698,762	+		RR42_RS12555	0.23	+1.3
2,698,762	+		RR42_RS12555	0.23	+0.1
2,698,762	+		RR42_RS12555	0.23	-0.5
2,698,763	-		RR42_RS12555	0.23	+0.0
2,698,985	-		RR42_RS12555	0.71	+1.3
2,698,985	-		RR42_RS12555	0.71	+0.2
2,698,985	-		RR42_RS12555	0.71	+1.5
2,699,094	-				+0.9
2,699,224	-				+0.2
2,699,224	-				-0.3
2,699,224	-				+0.3
2,699,224	-				-0.6
2,699,236	-				-0.9
2,699,484	+				+1.3
2,699,485	-				+0.6