Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12130

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,601,408	-		RR42_RS12125	0.73	+0.2
2,601,562	+				-1.3
2,601,789	+				-0.0
2,601,789	+				-0.4
2,601,789	+				-0.9
2,601,790	-				-0.6
2,601,793	-				+0.3
2,601,924	-				+0.5
2,602,024	-				+0.2
2,602,032	+				+1.6
2,602,234	+				-0.1
2,602,303	-				-0.3
2,602,394	+				+1.0
2,602,394	+				+0.1
2,602,395	-				-0.9
2,602,395	-				-0.7
2,602,786	+		RR42_RS12130	0.61	-0.3
2,602,902	+		RR42_RS12130	0.80	-0.9
2,602,962	-		RR42_RS12130	0.89	+1.6
2,603,020	+				-0.5
2,603,065	-				-0.6
2,603,260	+				-0.2
2,603,260	+				+0.3
2,603,260	+				-0.7
2,603,290	+				+0.0
2,603,292	+				+0.3
2,603,344	-				-0.2
2,603,407	-				+0.0
2,603,407	-				+1.2
2,603,435	+				-0.4
2,603,435	+				-0.5
2,603,574	+		RR42_RS12135	0.13	+0.9
2,603,574	+		RR42_RS12135	0.13	+0.2
2,603,574	+		RR42_RS12135	0.13	+0.5
2,603,575	-		RR42_RS12135	0.13	+0.9
2,603,575	-		RR42_RS12135	0.13	+0.9
2,603,575	-		RR42_RS12135	0.13	-0.1
2,603,575	-		RR42_RS12135	0.13	-0.3
2,603,575	-		RR42_RS12135	0.13	+0.0
2,603,629	-		RR42_RS12135	0.16	-0.1
2,603,629	-		RR42_RS12135	0.16	-0.3
2,603,777	+		RR42_RS12135	0.23	-0.6
2,603,777	+		RR42_RS12135	0.23	-0.1
2,603,793	+		RR42_RS12135	0.23	+0.3
2,603,794	-		RR42_RS12135	0.23	-0.5
2,603,898	+		RR42_RS12135	0.28	+0.4
2,603,898	+		RR42_RS12135	0.28	-0.3
2,603,899	-		RR42_RS12135	0.28	+0.7
2,603,899	-		RR42_RS12135	0.28	+0.5
2,603,899	-		RR42_RS12135	0.28	-0.1
2,603,900	+		RR42_RS12135	0.28	-0.3
2,603,900	+		RR42_RS12135	0.28	+0.4
2,603,900	+		RR42_RS12135	0.28	-0.5
2,603,900	+		RR42_RS12135	0.28	-0.1
2,603,900	+		RR42_RS12135	0.28	-0.4