Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12070

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,586,176	+				-0.6
2,586,176	+				-0.4
2,586,177	-				-0.6
2,586,177	-				-1.1
2,586,340	+		RR42_RS12065	0.33	-0.7
2,586,415	+		RR42_RS12065	0.61	+0.0
2,586,415	+		RR42_RS12065	0.61	-2.3
2,586,475	+		RR42_RS12065	0.83	-0.4
2,586,476	-		RR42_RS12065	0.84	-0.1
2,586,817	+		RR42_RS12070	0.17	+0.5
2,586,910	+		RR42_RS12070	0.23	-0.1
2,587,085	+		RR42_RS12070	0.35	+1.0
2,587,085	+		RR42_RS12070	0.35	+1.0
2,587,085	+		RR42_RS12070	0.35	+0.1
2,587,088	-		RR42_RS12070	0.35	+1.2
2,587,088	-		RR42_RS12070	0.35	-1.4
2,587,108	+		RR42_RS12070	0.37	+0.9
2,587,108	+		RR42_RS12070	0.37	-0.7
2,587,124	-		RR42_RS12070	0.38	+0.4
2,587,195	+		RR42_RS12070	0.43	+0.7
2,587,607	+		RR42_RS12070	0.71	+0.0
2,587,675	+		RR42_RS12070	0.75	-0.1
2,587,675	+		RR42_RS12070	0.75	-0.7
2,587,675	+		RR42_RS12070	0.75	+1.2
2,587,676	-		RR42_RS12070	0.75	-0.6
2,587,676	-		RR42_RS12070	0.75	+0.2
2,587,676	-		RR42_RS12070	0.75	+1.0
2,587,897	-				+0.6
2,588,169	+		RR42_RS12075	0.29	-0.0
2,588,461	+				+0.9
2,588,520	+				-0.6
2,588,520	+				-2.8
2,588,521	-				-0.0
2,588,521	-				+0.4
2,588,534	-				+0.9
2,588,536	+				+0.3
2,588,536	+				-1.2
2,588,536	+				-1.8
2,588,536	+				+0.3
2,588,536	+				-1.1
2,588,537	-				+0.7
2,588,537	-				-0.5
2,588,537	-				-0.4
2,588,537	-				-0.1
2,588,537	-				+0.3
2,588,537	-				-0.4
2,588,537	-				-0.3
2,588,649	+				+0.0
2,588,649	+				-0.3
2,588,649	+				+0.1
2,588,649	+				-0.9
2,588,649	+				-0.1
2,588,650	-				-1.8
2,588,657	+		RR42_RS12080	0.10	-0.5
2,588,658	-		RR42_RS12080	0.10	+0.9
2,588,787	+		RR42_RS12080	0.28	+0.5
2,588,787	+		RR42_RS12080	0.28	-0.1