Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11615

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,486,407	+		RR42_RS11610	0.79	+0.2
2,486,408	-		RR42_RS11610	0.79	-0.5
2,486,409	+		RR42_RS11610	0.79	-1.2
2,486,409	+		RR42_RS11610	0.79	-0.4
2,486,410	-		RR42_RS11610	0.79	-0.8
2,486,410	-		RR42_RS11610	0.79	+1.0
2,486,466	-		RR42_RS11610	0.82	+0.9
2,486,466	-		RR42_RS11610	0.82	+0.1
2,486,466	-		RR42_RS11610	0.82	-2.7
2,486,466	-		RR42_RS11610	0.82	-0.0
2,486,524	+		RR42_RS11610	0.84	-0.5
2,486,582	+		RR42_RS11610	0.87	-0.5
2,486,653	+		RR42_RS11610	0.90	-0.0
2,486,945	+				+0.2
2,486,996	+				-0.7
2,486,996	+				-0.1
2,486,997	-				+0.6
2,487,033	+				+0.1
2,487,190	+		RR42_RS11615	0.17	-1.3
2,487,190	+		RR42_RS11615	0.17	+0.5
2,487,190	+		RR42_RS11615	0.17	-0.1
2,487,255	-		RR42_RS11615	0.22	+0.6
2,487,272	+		RR42_RS11615	0.24	-0.2
2,487,273	-		RR42_RS11615	0.24	+1.1
2,487,374	+		RR42_RS11615	0.32	-0.6
2,487,488	+		RR42_RS11615	0.41	+0.8
2,487,853	-		RR42_RS11615	0.69	-0.6
2,487,927	-		RR42_RS11615	0.75	+0.6
2,488,005	-		RR42_RS11615	0.81	-0.8
2,488,101	+		RR42_RS11615	0.89	+0.1
2,488,109	-		RR42_RS11615	0.89	+0.1
2,488,292	+				-0.0
2,488,292	+				+0.2
2,488,292	+				+0.2
2,488,293	-				+0.2
2,488,510	+		RR42_RS11620	0.20	+0.1
2,488,729	+		RR42_RS11620	0.49	+0.0
2,488,760	+		RR42_RS11620	0.53	-0.8
2,488,761	-		RR42_RS11620	0.54	+0.4
2,488,761	-		RR42_RS11620	0.54	-0.2
2,489,011	+		RR42_RS11620	0.87	-0.7
2,489,011	+		RR42_RS11620	0.87	+0.9
2,489,012	-		RR42_RS11620	0.87	-0.8
2,489,092	-				+1.1
2,489,117	-				-0.2
2,489,245	-				-0.5