Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10640

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,272,556	-				-0.3
2,272,580	-				+0.7
2,272,591	+				-0.7
2,272,652	-				+1.1
2,272,751	-				-0.2
2,272,755	-				-1.3
2,272,777	+				+0.4
2,272,979	-				+1.1
2,273,119	+				-1.3
2,273,119	+				+0.9
2,273,120	-				+0.1
2,273,120	-				-0.1
2,273,130	-				-1.0
2,273,230	-				-0.6
2,273,230	-				+0.7
2,273,230	-				-0.1
2,273,417	-		RR42_RS10640	0.19	+0.1
2,273,430	+		RR42_RS10640	0.21	+0.1
2,273,431	-		RR42_RS10640	0.21	-1.3
2,273,454	+		RR42_RS10640	0.23	-1.2
2,273,454	+		RR42_RS10640	0.23	-1.0
2,273,454	+		RR42_RS10640	0.23	-0.5
2,273,454	+		RR42_RS10640	0.23	+0.2
2,273,454	+		RR42_RS10640	0.23	+0.6
2,273,455	-		RR42_RS10640	0.23	-1.0
2,273,576	-		RR42_RS10640	0.34	+0.1
2,273,662	-		RR42_RS10640	0.41	+0.4
2,273,756	-		RR42_RS10640	0.50	+0.3
2,273,759	+		RR42_RS10640	0.50	-1.0
2,273,759	+		RR42_RS10640	0.50	-0.2
2,273,759	+		RR42_RS10640	0.50	-1.4
2,273,760	-		RR42_RS10640	0.50	-1.0
2,273,760	-		RR42_RS10640	0.50	+0.5
2,273,760	-		RR42_RS10640	0.50	-0.1
2,273,968	-		RR42_RS10640	0.69	-0.0
2,274,037	-		RR42_RS10640	0.75	+0.4
2,274,037	-		RR42_RS10640	0.75	-1.0
2,274,043	-		RR42_RS10640	0.75	+0.1
2,274,125	+		RR42_RS10640	0.83	+0.2
2,274,146	+		RR42_RS10640	0.85	+0.4
2,274,146	+		RR42_RS10640	0.85	-0.7
2,274,147	-		RR42_RS10640	0.85	-0.3
2,274,169	-		RR42_RS10640	0.87	+0.2
2,274,251	-				-0.9
2,274,472	+				-1.3
2,274,472	+				-0.1
2,274,473	-				+0.1
2,274,549	+		RR42_RS10645	0.22	-0.5
2,274,549	+		RR42_RS10645	0.22	-0.5
2,274,654	+		RR42_RS10645	0.53	+0.2
2,274,654	+		RR42_RS10645	0.53	-0.6
2,274,655	-		RR42_RS10645	0.53	+0.6
2,274,655	-		RR42_RS10645	0.53	+0.7
2,274,656	+		RR42_RS10645	0.53	+0.0
2,274,657	-		RR42_RS10645	0.53	-0.6
2,274,657	-		RR42_RS10645	0.53	-2.4
2,274,751	-		RR42_RS10645	0.80	+0.3
2,274,751	-		RR42_RS10645	0.80	-0.5
2,274,767	-		RR42_RS10645	0.85	-0.2
2,274,767	-		RR42_RS10645	0.85	+1.1
2,274,894	-				-0.0
2,274,894	-				+1.4
2,274,895	+				-0.5
2,274,895	+				-0.9
2,274,895	+				+0.2
2,274,895	+				+0.4
2,274,895	+				+0.1
2,274,895	+				+0.0
2,274,896	-				-0.1
2,274,959	-				-0.0
2,274,966	+				-1.7
2,274,967	-				+0.5
2,274,967	-				-2.0
2,275,175	+		RR42_RS10650	0.10	-0.4
2,275,239	+		RR42_RS10650	0.14	+0.1