Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10605

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,264,002	+		RR42_RS10600	0.14	-0.4
2,264,002	+		RR42_RS10600	0.14	-1.9
2,264,003	-		RR42_RS10600	0.14	+0.6
2,264,053	-		RR42_RS10600	0.19	-0.3
2,264,053	-		RR42_RS10600	0.19	+0.4
2,264,203	+		RR42_RS10600	0.34	-0.6
2,264,218	+		RR42_RS10600	0.35	-0.3
2,264,218	+		RR42_RS10600	0.35	-0.7
2,264,218	+		RR42_RS10600	0.35	-1.1
2,264,219	-		RR42_RS10600	0.35	-0.5
2,264,338	+		RR42_RS10600	0.47	-1.3
2,264,339	-		RR42_RS10600	0.47	+0.4
2,264,468	+		RR42_RS10600	0.59	+0.9
2,264,469	-		RR42_RS10600	0.59	+0.7
2,264,469	-		RR42_RS10600	0.59	-0.9
2,264,469	-		RR42_RS10600	0.59	+0.2
2,264,469	-		RR42_RS10600	0.59	-0.8
2,264,469	-		RR42_RS10600	0.59	-0.2
2,264,470	+		RR42_RS10600	0.60	-1.7
2,264,470	+		RR42_RS10600	0.60	+0.8
2,264,470	+		RR42_RS10600	0.60	-0.5
2,264,470	+		RR42_RS10600	0.60	+0.2
2,264,470	+		RR42_RS10600	0.60	-1.6
2,264,470	+		RR42_RS10600	0.60	+0.0
2,264,470	+		RR42_RS10600	0.60	+0.8
2,264,470	+				+1.3
2,264,470	+		RR42_RS10600	0.60	-0.4
2,264,470	+		RR42_RS10600	0.60	+0.7
2,264,470	+		RR42_RS10600	0.60	+0.1
2,264,470	+		RR42_RS10600	0.60	-0.3
2,264,470	+		RR42_RS10600	0.60	-0.3
2,264,470	+		RR42_RS10600	0.60	+0.4
2,264,470	+		RR42_RS10600	0.60	-1.4
2,264,471	-		RR42_RS10600	0.60	+0.3
2,264,471	-		RR42_RS10600	0.60	+0.7
2,264,471	-		RR42_RS10600	0.60	-1.9
2,264,471	-		RR42_RS10600	0.60	+0.6
2,264,471	-		RR42_RS10600	0.60	+1.7
2,264,471	-		RR42_RS10600	0.60	-0.5
2,264,471	-		RR42_RS10600	0.60	+0.1
2,264,472	+		RR42_RS10600	0.60	+0.6
2,264,472	+		RR42_RS10600	0.60	-0.4
2,264,472	+		RR42_RS10600	0.60	-0.9
2,264,473	-		RR42_RS10600	0.60	-0.7
2,264,473	-		RR42_RS10600	0.60	-0.3
2,264,473	-		RR42_RS10600	0.60	-0.1
2,264,473	-		RR42_RS10600	0.60	-0.4
2,264,597	+		RR42_RS10600	0.72	+0.6
2,264,703	+		RR42_RS10600	0.82	-1.6
2,264,933	-				-2.0
2,264,997	+				-0.3
2,264,997	+				-1.1
2,264,997	+				-0.2
2,264,997	+				+0.1
2,264,998	-				+0.4
2,265,028	+				+0.6
2,265,028	+				+0.2
2,265,028	+				-0.3
2,265,029	-				+1.0
2,265,029	-				-1.2
2,265,054	+				+0.1
2,265,293	+		RR42_RS10605	0.19	-1.5
2,265,293	+		RR42_RS10605	0.19	+0.7
2,265,294	-		RR42_RS10605	0.19	+0.4
2,265,297	+		RR42_RS10605	0.20	-0.9
2,265,298	-		RR42_RS10605	0.20	+0.3
2,265,298	-		RR42_RS10605	0.20	+0.3
2,265,298	-		RR42_RS10605	0.20	+0.6
2,265,298	-		RR42_RS10605	0.20	+0.4
2,265,298	-		RR42_RS10605	0.20	+1.4
2,265,298	-		RR42_RS10605	0.20	+0.3
2,265,336	+		RR42_RS10605	0.22	-0.8
2,265,336	+		RR42_RS10605	0.22	+1.1
2,265,336	+		RR42_RS10605	0.22	+0.9
2,265,337	-		RR42_RS10605	0.22	+1.1
2,265,349	+		RR42_RS10605	0.22	-1.0
2,265,350	-		RR42_RS10605	0.23	+0.0
2,265,589	-		RR42_RS10605	0.35	+0.7
2,265,589	-		RR42_RS10605	0.35	+0.1
2,265,700	+		RR42_RS10605	0.41	+0.1
2,265,701	-		RR42_RS10605	0.42	+0.1
2,265,740	-		RR42_RS10605	0.44	-0.9
2,265,989	+		RR42_RS10605	0.57	-0.9
2,265,990	-		RR42_RS10605	0.57	+0.1
2,266,086	-		RR42_RS10605	0.62	+1.4
2,266,234	-		RR42_RS10605	0.70	+0.7
2,266,428	+		RR42_RS10605	0.81	-1.6
2,266,428	+		RR42_RS10605	0.81	+0.5
2,266,475	-		RR42_RS10605	0.83	-0.0
2,266,780	-				-1.0
2,266,780	-				-1.2
2,266,794	+				-0.1
2,266,862	+				+1.2
2,266,862	+				+0.1
2,266,896	+				-0.9
2,266,897	-				+0.0
2,266,920	+		RR42_RS10610	0.11	-2.1
2,266,921	-		RR42_RS10610	0.11	-0.7
2,266,986	-		RR42_RS10610	0.18	+0.0
2,267,023	+		RR42_RS10610	0.21	-0.5
2,267,023	+		RR42_RS10610	0.21	-0.4
2,267,023	+		RR42_RS10610	0.21	-0.1
2,267,024	-		RR42_RS10610	0.21	-0.6
2,267,026	-		RR42_RS10610	0.21	+0.1
2,267,029	+		RR42_RS10610	0.22	+0.2
2,267,029	+		RR42_RS10610	0.22	-0.5
2,267,030	-		RR42_RS10610	0.22	+1.1
2,267,094	+		RR42_RS10610	0.28	-0.3
2,267,095	-		RR42_RS10610	0.28	-0.2
2,267,163	+		RR42_RS10610	0.34	+0.7
2,267,237	-		RR42_RS10610	0.42	-1.1
2,267,454	-		RR42_RS10610	0.62	+0.4
2,267,454	-		RR42_RS10610	0.62	-0.1
2,267,480	-		RR42_RS10610	0.65	-0.1
2,267,767	-				-0.7