Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10415

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,228,711	+				+0.0
2,228,711	+				+0.2
2,228,711	+				-1.3
2,228,762	-				-0.6
2,228,804	+				-0.2
2,228,812	+				+0.1
2,228,813	-				-0.0
2,228,814	+				-0.1
2,228,815	-				-0.3
2,228,815	-				-0.7
2,228,824	+				+0.1
2,229,068	-		RR42_RS10410	0.27	+0.9
2,229,104	+		RR42_RS10410	0.36	-0.3
2,229,104	+		RR42_RS10410	0.36	+0.7
2,229,105	-		RR42_RS10410	0.37	-2.1
2,229,107	+		RR42_RS10410	0.37	-0.1
2,229,108	-		RR42_RS10410	0.38	+2.3
2,229,108	-		RR42_RS10410	0.38	+1.2
2,229,321	+				-0.5
2,229,321	+				-0.4
2,229,322	-				-0.3
2,229,332	+				-1.6
2,229,345	+				-0.0
2,229,345	+				+1.1
2,229,345	+				-1.2
2,229,346	-				+0.7
2,229,346	-				-0.4
2,229,654	+		RR42_RS10415	0.66	-1.5
2,229,729	+				+0.2
2,229,785	-				-0.0
2,229,897	+				-0.1
2,229,897	+				+0.1
2,229,898	-				+0.4
2,229,898	-				+1.1
2,229,937	+		RR42_RS10420	0.16	+0.1
2,229,938	-		RR42_RS10420	0.16	+0.1
2,229,938	-		RR42_RS10420	0.16	-1.9
2,230,042	+		RR42_RS10420	0.59	+0.8
2,230,043	-		RR42_RS10420	0.59	-0.5
2,230,043	-		RR42_RS10420	0.59	+0.0
2,230,043	-		RR42_RS10420	0.59	+0.7
2,230,043	-		RR42_RS10420	0.59	-0.3
2,230,043	-		RR42_RS10420	0.59	+0.6
2,230,081	+		RR42_RS10420	0.74	+0.1
2,230,234	+				-0.3
2,230,234	+				+1.3
2,230,235	-				+0.7
2,230,265	-				+0.7
2,230,272	-				-0.5
2,230,371	-				+0.2
2,230,482	+				-0.7
2,230,482	+				-0.8
2,230,628	+				-2.3
2,230,697	+				-0.9
2,230,697	+				-1.1
2,230,697	+				+0.3
2,230,697	+				+0.4
2,230,697	+				+0.3
2,230,698	-				+0.3
2,230,709	-				-2.1
2,230,715	+				-0.4
2,230,716	-				+0.7
2,230,716	-				-0.7