Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10170

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
2,177,387	+				-0.8
2,177,388	-				+0.8
2,177,391	+				-0.2
2,177,391	+				-0.9
2,177,391	+				+1.4
2,177,391	+				-0.8
2,177,392	-				-0.2
2,177,392	-				+0.7
2,177,427	+				+1.4
2,177,427	+				+0.2
2,177,427	+				-0.5
2,177,427	+				-1.1
2,177,428	-				+0.3
2,177,428	-				-0.9
2,177,428	-				+1.1
2,177,429	+				-0.2
2,177,429	+				-0.1
2,177,429	+				+0.2
2,177,460	-				-0.7
2,177,601	-				-0.5
2,177,601	-				-0.1
2,177,601	-				-0.2
2,177,706	+				+2.7
2,177,706	+				+0.4
2,177,706	+				-0.1
2,177,707	-				-0.1
2,177,738	+				-0.5
2,177,738	+				+0.1
2,177,738	+				+0.5
2,177,738	+				+1.9
2,177,739	-				-1.4
2,177,739	-				+0.4
2,177,739	-				+1.3
2,177,846	+				+0.2
2,177,846	+				+1.0
2,177,847	-				+1.0
2,177,954	+				+0.6
2,177,955	-				-0.3
2,177,969	+				-0.3
2,178,118	-				+0.3
2,178,136	-				-0.7
2,178,169	-				+0.4
2,178,217	+				-0.3
2,178,217	+				-0.5
2,178,218	-				+1.4
2,178,229	+				+0.3
2,178,267	+				-0.4
2,178,414	-		RR42_RS10170	0.23	-0.3
2,178,427	+		RR42_RS10170	0.29	+0.6
2,178,569	+				+0.7
2,178,570	-				+0.4
2,178,570	-				-0.8
2,178,724	+		RR42_RS10175	0.39	-0.3
2,178,724	+		RR42_RS10175	0.39	+0.7
2,178,724	+		RR42_RS10175	0.39	+1.4
2,178,725	-		RR42_RS10175	0.39	-0.5
2,178,725	-		RR42_RS10175	0.39	+0.1
2,178,752	+		RR42_RS10175	0.50	+2.3
2,178,817	+		RR42_RS10175	0.74	+2.3
2,178,817	+		RR42_RS10175	0.74	+0.4
2,178,817	+		RR42_RS10175	0.74	+0.3
2,178,818	-		RR42_RS10175	0.75	+0.5
2,178,818	-		RR42_RS10175	0.75	-0.3
2,178,820	+		RR42_RS10175	0.75	+0.7
2,178,820	+		RR42_RS10175	0.75	+1.0
2,178,857	-		RR42_RS10175	0.89	+0.4
2,179,074	+		RR42_RS10180	0.10	-0.1
2,179,148	+		RR42_RS10180	0.16	-2.0
2,179,148	+		RR42_RS10180	0.16	+0.5