Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08945

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,880,587	+		RR42_RS08935	0.80	-0.3
1,880,587	-		RR42_RS08935	0.80	+0.3
1,880,588	-		RR42_RS08935	0.80	-1.6
1,880,643	+		RR42_RS08935	0.87	+0.5
1,880,643	+		RR42_RS08935	0.87	+0.4
1,880,643	+		RR42_RS08935	0.87	-1.7
1,880,644	-		RR42_RS08935	0.88	+0.1
1,880,644	-		RR42_RS08935	0.88	+0.5
1,880,644	-		RR42_RS08935	0.88	+0.2
1,880,665	-				-0.4
1,880,665	-				+0.2
1,880,734	+				+0.9
1,880,734	+				-0.2
1,880,734	+				+0.5
1,880,735	-				+0.4
1,880,735	-				-0.5
1,880,735	-				+0.5
1,880,739	+				-0.2
1,880,740	-				+1.2
1,880,802	+				-0.4
1,880,803	-				-3.1
1,881,158	+				+0.1
1,881,159	-				+0.0
1,881,159	-				-0.0
1,881,256	+				+0.2
1,881,256	+				+0.3
1,881,257	-				+1.3
1,881,257	-				+1.1
1,881,262	+				-0.4
1,881,263	-				-1.2
1,881,263	-				+0.5
1,881,263	-				+0.2
1,881,263	-				-1.1
1,881,263	-				-0.5
1,881,267	+				-0.1
1,881,267	+				+0.1
1,881,268	-				+1.0
1,881,268	-				-0.1
1,881,300	+				+2.6
1,881,300	+				+0.2
1,881,301	-				+0.6
1,881,394	-		RR42_RS08945	0.35	-1.0
1,881,676	-				+0.4
1,881,690	+				-0.2
1,881,691	-				-0.5
1,881,691	-				-0.8
1,881,691	-				+0.2
1,881,706	-				-0.5
1,881,763	+				+0.4
1,881,763	+				-0.7
1,881,818	+		RR42_RS08950	0.12	+0.3
1,881,818	+		RR42_RS08950	0.12	-0.6
1,881,818	+		RR42_RS08950	0.12	-0.6
1,881,818	+		RR42_RS08950	0.12	+1.4
1,881,819	-		RR42_RS08950	0.12	+1.1
1,881,819	-		RR42_RS08950	0.12	+0.1
1,881,819	-		RR42_RS08950	0.12	+1.3
1,882,029	+		RR42_RS08950	0.40	-0.2
1,882,029	+		RR42_RS08950	0.40	-0.5
1,882,030	-		RR42_RS08950	0.40	-0.6
1,882,030	-		RR42_RS08950	0.40	-0.5
1,882,094	+		RR42_RS08950	0.49	+0.0
1,882,107	-		RR42_RS08950	0.51	+0.4
1,882,234	+		RR42_RS08950	0.67	+0.3
1,882,235	-		RR42_RS08950	0.68	+0.0
1,882,272	-		RR42_RS08950	0.73	-0.7
1,882,272	-		RR42_RS08950	0.73	-0.7
1,882,349	-		RR42_RS08950	0.83	+0.1
1,882,349	-		RR42_RS08950	0.83	+2.1
1,882,421	+				+0.5
1,882,422	-				+1.1
1,882,422	-				+1.0
1,882,422	-				-0.4
1,882,422	-				-1.8