Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07905

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,695,506	+		RR42_RS07900	0.38	+1.8
1,695,921	+		RR42_RS07900	0.71	-0.4
1,695,921	+		RR42_RS07900	0.71	-0.3
1,695,921	+		RR42_RS07900	0.71	+0.9
1,695,922	-		RR42_RS07900	0.71	+1.4
1,695,922	-		RR42_RS07900	0.71	-0.4
1,695,996	+		RR42_RS07900	0.77	-2.0
1,696,186	-				-0.3
1,696,186	-				+0.2
1,696,186	-				-1.4
1,696,516	+		RR42_RS07905	0.14	-0.8
1,696,517	-		RR42_RS07905	0.14	-1.5
1,696,517	-		RR42_RS07905	0.14	-0.1
1,696,618	+		RR42_RS07905	0.26	-1.5
1,696,711	+		RR42_RS07905	0.37	+2.8
1,696,711	+		RR42_RS07905	0.37	+0.8
1,696,754	+		RR42_RS07905	0.43	-1.3
1,696,754	+		RR42_RS07905	0.43	-2.0
1,696,755	-		RR42_RS07905	0.43	-0.0
1,696,755	-		RR42_RS07905	0.43	-1.5
1,696,755	-		RR42_RS07905	0.43	-0.5
1,696,870	+		RR42_RS07905	0.56	-1.5
1,696,966	+		RR42_RS07905	0.68	-0.4
1,696,966	+		RR42_RS07905	0.68	-1.5
1,696,967	-		RR42_RS07905	0.68	-1.1
1,697,125	+		RR42_RS07905	0.87	-1.0
1,697,125	+		RR42_RS07905	0.87	-0.9
1,697,126	-		RR42_RS07905	0.87	-1.8
1,697,126	-		RR42_RS07905	0.87	-0.9
1,697,126	-		RR42_RS07905	0.87	-0.6
1,697,135	+		RR42_RS07905	0.88	-1.5
1,697,176	+				-0.6
1,697,176	+				-0.2
1,697,176	+				-0.4
1,697,177	-				-0.2
1,697,177	-				-1.2
1,697,177	-				-0.8
1,697,179	+				-1.1
1,697,180	-				+0.2
1,697,219	-				-0.6
1,697,219	-				+1.4
1,697,219	-				-0.8
1,697,264	+				-0.4
1,697,276	-				-0.4
1,697,276	-				+0.2
1,697,439	+				-0.2
1,697,439	+				-0.9
1,697,440	-				+1.1
1,697,440	-				-0.5
1,697,440	-				-0.5
1,697,440	-				-1.0
1,697,440	-				+0.3
1,697,440	-				-0.5
1,697,507	-				+0.6
1,697,754	+				-0.9
1,697,761	+				-1.8
1,697,761	+				-0.8
1,697,762	-				-1.6
1,698,176	-		RR42_RS07910	0.34	+0.1
1,698,176	-		RR42_RS07910	0.34	-0.7
1,698,176	-		RR42_RS07910	0.34	-0.6
1,698,176	-		RR42_RS07910	0.34	-0.3
1,698,176	-		RR42_RS07910	0.34	-0.0
1,698,227	-		RR42_RS07910	0.38	+0.2