Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07815

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,672,512	+		RR42_RS07805	0.81	-0.3
1,672,512	+		RR42_RS07805	0.81	-0.1
1,672,513	-		RR42_RS07805	0.81	+0.5
1,672,526	-		RR42_RS07805	0.82	-0.1
1,672,656	+				-0.5
1,672,656	+				-1.0
1,672,737	+				-0.5
1,672,738	-				+0.9
1,672,957	+		RR42_RS07810	0.33	+0.4
1,672,957	+		RR42_RS07810	0.33	-0.2
1,672,957	+		RR42_RS07810	0.33	-1.3
1,672,958	-		RR42_RS07810	0.33	-0.2
1,672,958	-		RR42_RS07810	0.33	+0.2
1,672,958	-		RR42_RS07810	0.33	-1.1
1,672,963	+		RR42_RS07810	0.34	-0.7
1,672,963	+		RR42_RS07810	0.34	+1.3
1,673,036	-		RR42_RS07810	0.45	+0.1
1,673,095	+		RR42_RS07810	0.54	+0.6
1,673,186	-		RR42_RS07810	0.68	+0.8
1,673,302	-		RR42_RS07810	0.85	-0.8
1,673,326	+		RR42_RS07810	0.89	+0.2
1,673,327	-		RR42_RS07810	0.89	+0.2
1,673,327	-		RR42_RS07810	0.89	+1.2
1,673,353	+				+0.9
1,673,353	+				+1.6
1,673,353	+				-0.0
1,673,353	+				+0.2
1,673,354	-				+0.9
1,673,354	-				-0.4
1,673,354	-				+0.6
1,673,531	+		RR42_RS07815	0.19	-0.3
1,673,551	-		RR42_RS07815	0.21	-1.1
1,673,791	-		RR42_RS07815	0.54	-1.7
1,674,529	+		RR42_RS07820	0.31	+0.4
1,674,530	-		RR42_RS07820	0.31	+0.6
1,674,551	-		RR42_RS07820	0.32	+0.5
1,674,601	+		RR42_RS07820	0.36	+1.0
1,674,602	-		RR42_RS07820	0.36	+0.2
1,674,602	-		RR42_RS07820	0.36	-0.1
1,674,698	-		RR42_RS07820	0.44	-2.0
1,674,853	+		RR42_RS07820	0.56	-0.5
1,674,889	+		RR42_RS07820	0.59	+0.9
1,674,889	+		RR42_RS07820	0.59	-1.1
1,674,889	+		RR42_RS07820	0.59	+0.9
1,674,890	-		RR42_RS07820	0.59	-0.9
1,674,997	+		RR42_RS07820	0.67	+0.5
1,674,998	-		RR42_RS07820	0.67	-0.2
1,674,998	-		RR42_RS07820	0.67	-1.3
1,675,000	+		RR42_RS07820	0.67	-0.1
1,675,089	-		RR42_RS07820	0.74	+0.3