Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07605

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,627,488	+		RR42_RS07595	0.79	+0.0
1,627,488	+		RR42_RS07595	0.79	-2.6
1,627,488	+		RR42_RS07595	0.79	+0.4
1,627,489	-		RR42_RS07595	0.79	+0.1
1,627,499	+		RR42_RS07595	0.80	-0.1
1,627,500	-		RR42_RS07595	0.81	-0.8
1,627,500	-		RR42_RS07595	0.81	-0.1
1,627,503	+		RR42_RS07595	0.81	-0.2
1,627,503	+		RR42_RS07595	0.81	+0.1
1,627,503	+		RR42_RS07595	0.81	+0.1
1,627,503	+		RR42_RS07595	0.81	+0.1
1,627,503	+		RR42_RS07595	0.81	-0.2
1,627,504	-		RR42_RS07595	0.81	+0.2
1,627,504	-		RR42_RS07595	0.81	+0.2
1,627,504	-		RR42_RS07595	0.81	-0.6
1,627,504	-		RR42_RS07595	0.81	-1.1
1,627,504	-		RR42_RS07595	0.81	-0.4
1,627,593	+				-1.1
1,627,593	+				+0.3
1,627,594	-				-0.5
1,627,600	-				-0.3
1,627,805	+		RR42_RS07600	0.52	-0.3
1,627,805	+		RR42_RS07600	0.52	-0.1
1,627,806	-		RR42_RS07600	0.52	-1.3
1,627,806	-		RR42_RS07600	0.52	+0.7
1,627,806	-		RR42_RS07600	0.52	-0.7
1,627,806	-		RR42_RS07600	0.52	-0.9
1,627,806	-		RR42_RS07600	0.52	+0.2
1,627,835	+		RR42_RS07600	0.64	+2.2
1,627,836	-		RR42_RS07600	0.64	+0.2
1,627,836	-		RR42_RS07600	0.64	+1.1
1,627,836	-		RR42_RS07600	0.64	-0.5
1,627,869	+		RR42_RS07600	0.77	+0.0
1,627,870	-		RR42_RS07600	0.77	+0.6
1,627,870	-		RR42_RS07600	0.77	-1.0
1,627,879	-		RR42_RS07600	0.80	+0.9
1,627,901	+		RR42_RS07600	0.89	+0.4
1,627,901	+		RR42_RS07600	0.89	-1.7
1,627,901	+		RR42_RS07600	0.89	+0.3
1,627,901	+		RR42_RS07600	0.89	+2.9
1,627,902	-		RR42_RS07600	0.89	+0.7
1,627,902	-		RR42_RS07600	0.89	+0.4
1,627,902	-		RR42_RS07600	0.89	+0.2
1,627,902	-		RR42_RS07600	0.89	-0.3
1,627,902	-		RR42_RS07600	0.89	+0.8
1,627,902	-		RR42_RS07600	0.89	-0.1
1,627,902	-		RR42_RS07600	0.89	+0.2
1,627,902	-		RR42_RS07600	0.89	-1.6
1,627,902	-		RR42_RS07600	0.89	-0.4
1,627,902	-		RR42_RS07600	0.89	+0.3
1,627,902	-		RR42_RS07600	0.89	-0.0
1,627,902	-		RR42_RS07600	0.89	-1.2
1,627,925	+				-0.4
1,627,925	+				-0.1
1,627,925	+				+0.4
1,627,925	+				+2.2
1,627,925	+				+3.2
1,627,926	-				-0.5
1,627,926	-				-0.9
1,627,926	-				+1.3
1,627,926	-				+1.1
1,627,926	-				+1.6
1,627,926	-				-0.2
1,627,926	-				-2.5
1,628,058	+				-0.5
1,628,058	+				-0.1
1,628,170	+				-1.3
1,628,170	+				+0.2
1,628,276	+				-0.4
1,628,276	+				-0.9
1,628,276	+				-0.4
1,628,276	+				+0.2
1,628,276	+				-0.7
1,628,277	-				-1.7
1,628,277	-				-3.1
1,628,465	-				-0.9
1,628,465	-				-0.5
1,628,685	-		RR42_RS07605	0.21	-1.7
1,628,978	+		RR42_RS07605	0.38	-1.1
1,628,979	-		RR42_RS07605	0.38	-0.1
1,628,991	-		RR42_RS07605	0.38	+0.2
1,629,008	+		RR42_RS07605	0.39	-2.1
1,629,075	-		RR42_RS07605	0.43	-0.5
1,629,077	+		RR42_RS07605	0.43	-0.2
1,629,077	+		RR42_RS07605	0.43	-1.1
1,629,078	-		RR42_RS07605	0.43	-1.9
1,629,116	+		RR42_RS07605	0.45	-0.1
1,629,136	+		RR42_RS07605	0.46	-2.1
1,629,143	+		RR42_RS07605	0.47	+0.1
1,629,543	-		RR42_RS07605	0.69	-1.0
1,629,656	-		RR42_RS07605	0.75	+0.3
1,629,744	-		RR42_RS07605	0.80	-1.1
1,629,749	+		RR42_RS07605	0.81	+0.9
1,629,750	-		RR42_RS07605	0.81	+0.6
1,630,046	+				-2.6
1,630,095	-				-2.5
1,630,144	-				-1.3
1,630,192	+				+0.0
1,630,626	+		RR42_RS07610	0.38	-0.2
1,630,626	+		RR42_RS07610	0.38	-0.3
1,630,627	-		RR42_RS07610	0.38	-0.2
1,630,636	-		RR42_RS07610	0.39	-0.7
1,630,674	+		RR42_RS07610	0.42	-0.2
1,630,675	-		RR42_RS07610	0.42	-1.0