Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07550

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,612,881	+		RR42_RS07545	0.20	-1.2
1,612,881	+		RR42_RS07545	0.20	-0.0
1,612,881	+		RR42_RS07545	0.20	-0.5
1,612,882	-		RR42_RS07545	0.20	+0.5
1,612,882	-		RR42_RS07545	0.20	-1.7
1,612,882	-		RR42_RS07545	0.20	-0.7
1,612,882	-		RR42_RS07545	0.20	+1.0
1,612,882	-		RR42_RS07545	0.20	-0.2
1,612,882	-		RR42_RS07545	0.20	+0.0
1,613,004	+		RR42_RS07545	0.34	-0.5
1,613,005	-		RR42_RS07545	0.34	+1.1
1,613,005	-		RR42_RS07545	0.34	+0.2
1,613,465	-		RR42_RS07545	0.88	+0.9
1,613,465	-		RR42_RS07545	0.88	-1.5
1,613,545	-				-0.1
1,613,607	+				-0.1
1,613,608	-				+1.0
1,613,608	-				+0.3
1,613,711	+		RR42_RS07550	0.21	-0.3
1,613,711	+		RR42_RS07550	0.21	+2.1
1,613,712	-		RR42_RS07550	0.21	+0.9
1,613,787	+		RR42_RS07550	0.32	-0.5
1,613,814	+		RR42_RS07550	0.35	-1.5
1,613,814	+		RR42_RS07550	0.35	+0.1
1,613,814	+		RR42_RS07550	0.35	+0.9
1,613,814	+		RR42_RS07550	0.35	-0.1
1,613,814	+		RR42_RS07550	0.35	+0.3
1,613,814	+		RR42_RS07550	0.35	+1.0
1,613,814	+		RR42_RS07550	0.35	+2.2
1,613,815	-		RR42_RS07550	0.36	+0.3
1,613,815	-		RR42_RS07550	0.36	+0.8
1,613,815	-		RR42_RS07550	0.36	+0.8
1,613,815	-		RR42_RS07550	0.36	-0.2
1,613,815	-		RR42_RS07550	0.36	-1.4
1,613,815	-		RR42_RS07550	0.36	+0.4
1,613,815	-		RR42_RS07550	0.36	-0.8
1,613,815	-		RR42_RS07550	0.36	-0.3
1,614,154	-		RR42_RS07550	0.83	+0.1
1,614,154	-		RR42_RS07550	0.83	+1.0
1,614,353	+				+0.7
1,614,354	-				+0.5
1,614,468	+				-2.3
1,614,468	+				+0.3
1,614,469	-				-1.5
1,614,494	+				+0.4
1,614,494	+				-0.3
1,614,560	-				+0.9
1,614,599	-				-2.7
1,614,599	-				-1.9
1,614,717	+				-1.7
1,615,240	-		RR42_RS07555	0.33	-2.1