Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07225

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,539,665	+		RR42_RS07215	0.46	+0.2
1,539,689	-		RR42_RS07215	0.54	-2.7
1,539,759	-		RR42_RS07215	0.75	+0.1
1,539,853	+				+0.3
1,539,854	+				-0.1
1,539,854	+				-1.5
1,539,855	-				-0.1
1,539,874	+				+0.7
1,539,874	+				-1.8
1,540,050	+				-0.7
1,540,051	-				-0.2
1,540,051	-				-0.3
1,540,104	-				-0.3
1,540,104	-				+0.3
1,540,177	-		RR42_RS07220	0.17	-0.5
1,540,195	-		RR42_RS07220	0.26	+0.5
1,540,206	-		RR42_RS07220	0.32	-0.7
1,540,206	-		RR42_RS07220	0.32	-0.3
1,540,207	+		RR42_RS07220	0.33	+0.8
1,540,451	+				-0.3
1,540,451	+				-0.2
1,540,452	-				+0.3
1,540,466	+				+0.7
1,540,572	+				-0.0
1,540,573	-				+0.2
1,540,573	-				-0.9
1,540,715	+		RR42_RS07225	0.41	-0.9
1,540,894	+				+0.1
1,540,894	+				+0.2
1,540,894	+				+0.4
1,540,918	+				+0.6
1,541,243	+				+0.2
1,541,244	-				+0.9
1,541,273	+				-0.1
1,541,273	+				+0.9
1,541,273	+				+0.9
1,541,400	-				-0.1
1,541,444	+				-0.6
1,541,445	-				+0.5
1,541,445	-				+2.9
1,541,567	-				+0.9
1,541,567	-				-0.7
1,541,661	+				-1.4
1,541,662	-				-0.1
1,541,738	+				+0.5
1,541,750	-				+2.3
1,541,766	-				+0.1
1,541,766	-				-0.1