Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07150
Experiment: R2A with A22 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with A22 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,531,884 | - | RR42_RS07145 | 0.49 | +0.9 | |
1,531,884 | - | RR42_RS07145 | 0.49 | -2.3 | |
1,531,937 | + | RR42_RS07145 | 0.52 | -1.4 | |
1,532,013 | - | RR42_RS07145 | 0.56 | +0.4 | |
1,532,457 | - | RR42_RS07145 | 0.80 | +0.2 | |
1,532,474 | + | RR42_RS07145 | 0.81 | -0.5 | |
1,532,475 | - | RR42_RS07145 | 0.81 | -0.3 | |
1,532,768 | + | -2.6 | |||
1,532,857 | + | +0.9 | |||
1,533,195 | - | RR42_RS07150 | 0.47 | -1.6 | |
1,533,633 | - | -1.6 | |||
1,533,640 | - | +0.3 | |||
1,533,640 | - | +0.2 | |||
1,533,719 | + | -0.3 | |||
1,533,720 | - | -0.1 | |||
1,533,941 | - | RR42_RS07155 | 0.39 | +0.6 | |
1,534,281 | - | RR42_RS07155 | 0.84 | +2.1 | |
1,534,344 | - | -0.4 | |||
1,534,429 | + | -1.2 | |||
1,534,462 | - | +0.4 |
Or see this region's nucleotide sequence