Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07060

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,511,547	+		RR42_RS07050	0.66	+0.3
1,511,547	+		RR42_RS07050	0.66	+0.7
1,511,548	-		RR42_RS07050	0.66	+0.3
1,511,585	+		RR42_RS07050	0.72	-0.5
1,511,585	+		RR42_RS07050	0.72	+1.6
1,511,681	-		RR42_RS07050	0.88	+0.7
1,511,681	-		RR42_RS07050	0.88	+0.5
1,511,681	-		RR42_RS07050	0.88	+0.1
1,511,681	-		RR42_RS07050	0.88	-2.0
1,511,681	-		RR42_RS07050	0.88	-1.4
1,511,725	+				+0.8
1,511,785	+				-0.8
1,511,786	-				+0.3
1,511,788	+				-0.7
1,511,789	-				-0.1
1,511,881	-				-0.0
1,512,033	-				+0.1
1,512,041	+				+1.1
1,512,041	+				+0.0
1,512,041	+				-0.4
1,512,042	-				-0.7
1,512,089	+		RR42_RS07055	0.10	-0.8
1,512,089	+		RR42_RS07055	0.10	-0.3
1,512,121	+		RR42_RS07055	0.17	-1.1
1,512,121	+		RR42_RS07055	0.17	+0.4
1,512,331	+		RR42_RS07055	0.58	-0.9
1,512,331	+		RR42_RS07055	0.58	+0.4
1,512,332	-		RR42_RS07055	0.58	-0.5
1,512,332	-		RR42_RS07055	0.58	+1.6
1,512,332	-		RR42_RS07055	0.58	-0.5
1,512,332	-		RR42_RS07055	0.58	-0.4
1,512,403	+		RR42_RS07055	0.72	-1.0
1,512,414	-		RR42_RS07055	0.74	-0.3
1,512,437	-		RR42_RS07055	0.79	-0.8
1,512,445	-		RR42_RS07055	0.80	-0.3
1,512,520	+				+0.7
1,512,520	+				+0.2
1,512,521	-				+0.9
1,512,521	-				+0.4
1,512,521	-				-1.7
1,512,596	-		RR42_RS07060	0.26	-0.3
1,512,619	-		RR42_RS07060	0.37	-1.4
1,512,619	-		RR42_RS07060	0.37	-0.5
1,512,719	-		RR42_RS07060	0.83	-0.9
1,512,756	-				-1.9
1,512,756	-				-1.1
1,512,756	-				-0.2
1,512,823	+				-0.5
1,512,823	+				+0.9
1,512,824	-				-0.5
1,512,833	-				-0.4
1,512,935	-				+0.2
1,512,984	-				-0.0
1,513,055	+				-2.0
1,513,152	-				+0.4
1,513,153	+				+0.8
1,513,154	-				+0.6
1,513,154	-				-0.5
1,513,297	-				+1.1
1,513,451	-		RR42_RS07065	0.14	-0.0
1,513,452	+		RR42_RS07065	0.14	-0.7
1,513,498	-		RR42_RS07065	0.15	-0.9
1,513,621	+		RR42_RS07065	0.20	+0.9
1,513,621	+		RR42_RS07065	0.20	+0.7
1,513,633	+		RR42_RS07065	0.20	+0.6
1,513,713	+		RR42_RS07065	0.23	+1.4
1,513,713	+		RR42_RS07065	0.23	+0.7