Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06655

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,450,363	+				-0.1
1,450,363	+				+1.3
1,450,364	-				-0.5
1,450,364	-				+0.1
1,450,366	+				-0.5
1,450,366	+				-0.3
1,450,367	-				+0.2
1,450,524	+				-0.1
1,450,544	+				+0.6
1,450,551	-				+0.6
1,450,556	-				-1.4
1,450,556	-				-0.2
1,450,556	-				-0.4
1,450,679	+				-0.3
1,450,679	+				+0.1
1,450,679	+				+0.9
1,450,680	-				-0.1
1,450,680	-				+0.1
1,450,680	-				-0.5
1,450,680	-				+0.2
1,450,683	-				+0.5
1,450,763	+		RR42_RS06650	0.12	-0.7
1,450,763	+		RR42_RS06650	0.12	+0.5
1,450,779	-		RR42_RS06650	0.14	-0.7
1,450,779	-		RR42_RS06650	0.14	-0.8
1,450,866	+		RR42_RS06650	0.30	-0.3
1,450,867	-				+0.9
1,450,898	+		RR42_RS06650	0.35	+0.4
1,450,898	+		RR42_RS06650	0.35	-0.5
1,450,899	-		RR42_RS06650	0.35	-0.5
1,450,899	-		RR42_RS06650	0.35	+0.7
1,450,899	-		RR42_RS06650	0.35	+0.2
1,450,978	+		RR42_RS06650	0.49	-0.7
1,450,979	-		RR42_RS06650	0.49	+0.1
1,451,087	+		RR42_RS06650	0.68	-0.1
1,451,088	-		RR42_RS06650	0.68	-0.2
1,451,169	+		RR42_RS06650	0.83	-0.9
1,451,169	+		RR42_RS06650	0.83	-0.5
1,451,169	+		RR42_RS06650	0.83	+0.5
1,451,169	+		RR42_RS06650	0.83	-0.7
1,451,169	+		RR42_RS06650	0.83	-0.7
1,451,169	+		RR42_RS06650	0.83	-0.3
1,451,169	+		RR42_RS06650	0.83	+0.2
1,451,170	-		RR42_RS06650	0.83	-0.6
1,451,170	-		RR42_RS06650	0.83	-0.9
1,451,170	-		RR42_RS06650	0.83	-0.5
1,451,170	-		RR42_RS06650	0.83	-0.3
1,451,170	-		RR42_RS06650	0.83	-0.2
1,451,170	-		RR42_RS06650	0.83	+0.3
1,451,170	-		RR42_RS06650	0.83	+0.6
1,451,170	-		RR42_RS06650	0.83	-0.3
1,451,170	-		RR42_RS06650	0.83	-0.5
1,451,170	-		RR42_RS06650	0.83	+0.6
1,451,179	+		RR42_RS06650	0.84	-0.1
1,451,270	+				+0.5
1,451,270	+				+0.8
1,451,270	+				-0.3
1,451,271	-				-0.3
1,451,271	-				-1.4
1,451,271	-				-0.7
1,451,271	-				+0.5
1,451,271	-				+0.3
1,451,307	+		RR42_RS06655	0.26	-1.4
1,451,308	+		RR42_RS06655	0.26	-1.1
1,451,308	+		RR42_RS06655	0.26	-1.9
1,451,309	-		RR42_RS06655	0.27	+0.7
1,451,410	+		RR42_RS06655	0.78	+0.0
1,451,446	+				-1.2
1,451,446	+				-0.5
1,451,447	-				-0.1
1,451,447	-				-0.7
1,451,461	-				-0.3
1,451,527	-				-0.6
1,451,590	+				+0.2
1,451,591	-				+0.9
1,451,680	+		RR42_RS06660	0.50	+1.8
1,451,797	+				+0.3
1,451,797	+				-1.4
1,451,798	-				-0.1
1,451,798	-				-0.8
1,451,798	-				-0.2
1,451,798	-				-0.0
1,451,798	-				-1.0
1,451,827	+				-0.3
1,451,827	+				-0.1
1,451,828	-				+0.0
1,451,838	+				-0.3
1,451,838	+				-1.9
1,451,839	-				-2.1
1,451,849	+				-0.1
1,451,849	+				+0.9
1,451,946	+		RR42_RS06665	0.11	-0.5
1,451,946	+		RR42_RS06665	0.11	+0.9
1,451,966	+		RR42_RS06665	0.12	-0.1
1,451,966	+		RR42_RS06665	0.12	-1.1
1,451,967	-		RR42_RS06665	0.13	-0.4
1,452,035	+		RR42_RS06665	0.18	+0.5
1,452,089	+		RR42_RS06665	0.23	-0.1
1,452,089	+		RR42_RS06665	0.23	-0.3
1,452,211	-		RR42_RS06665	0.33	+2.3
1,452,220	-		RR42_RS06665	0.34	+0.0
1,452,220	-		RR42_RS06665	0.34	+0.4
1,452,338	+		RR42_RS06665	0.44	-0.9
1,452,338	+		RR42_RS06665	0.44	+0.6
1,452,339	-		RR42_RS06665	0.44	+0.9
1,452,347	-		RR42_RS06665	0.45	-1.4
1,452,349	-		RR42_RS06665	0.45	-1.1