Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06400

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,401,759	+				+0.7
1,401,760	-				-1.7
1,401,760	-				-0.2
1,401,760	-				+0.0
1,401,763	+				+0.0
1,401,764	-				-0.4
1,401,778	-				-0.3
1,401,790	+				-2.6
1,401,947	+		RR42_RS06395	0.24	+0.9
1,401,948	-		RR42_RS06395	0.24	+1.1
1,402,088	+		RR42_RS06395	0.47	+0.1
1,402,089	-		RR42_RS06395	0.48	+1.2
1,402,170	-		RR42_RS06395	0.61	+0.3
1,402,187	+		RR42_RS06395	0.64	+1.1
1,402,188	-		RR42_RS06395	0.64	+1.2
1,402,265	+		RR42_RS06395	0.77	+1.2
1,402,266	-		RR42_RS06395	0.77	+0.9
1,402,266	-		RR42_RS06395	0.77	+0.5
1,402,301	+		RR42_RS06395	0.83	+1.7
1,402,301	+		RR42_RS06395	0.83	+1.0
1,402,302	-		RR42_RS06395	0.83	+0.7
1,402,307	+		RR42_RS06395	0.84	+1.8
1,402,538	-				+0.8
1,402,611	+				+0.5
1,402,612	-				-1.0
1,402,713	+				+0.5
1,402,713	+				+1.4
1,402,714	-				+0.4
1,402,714	-				+0.8
1,402,714	-				+0.6
1,402,714	-				-0.4
1,402,714	-				+1.1
1,402,767	+				+0.2
1,402,767	+				+0.6
1,402,768	-				+0.6
1,402,893	+		RR42_RS06400	0.17	-0.0
1,402,894	-		RR42_RS06400	0.17	-0.0
1,402,958	-		RR42_RS06400	0.21	-0.9
1,402,999	+		RR42_RS06400	0.24	+0.4
1,403,000	-		RR42_RS06400	0.24	-0.2
1,403,006	+		RR42_RS06400	0.24	-1.2
1,403,007	-		RR42_RS06400	0.24	+0.8
1,403,088	+		RR42_RS06400	0.29	-0.4
1,403,265	+		RR42_RS06400	0.40	-1.9
1,403,266	-		RR42_RS06400	0.40	-0.4
1,403,411	-		RR42_RS06400	0.49	-1.0
1,403,411	-		RR42_RS06400	0.49	+0.1
1,403,667	+		RR42_RS06400	0.64	+0.1
1,403,667	+		RR42_RS06400	0.64	-0.6
1,403,667	+		RR42_RS06400	0.64	-0.1
1,403,667	+		RR42_RS06400	0.64	+1.0
1,403,668	-		RR42_RS06400	0.64	-0.0
1,403,668	-		RR42_RS06400	0.64	+0.5
1,403,668	-		RR42_RS06400	0.64	+2.0
1,403,710	-		RR42_RS06400	0.67	-0.0
1,403,770	-		RR42_RS06400	0.71	+0.1
1,403,836	-		RR42_RS06400	0.75	+0.5
1,403,934	+		RR42_RS06400	0.81	-0.7
1,403,935	-		RR42_RS06400	0.81	+0.4
1,404,003	+		RR42_RS06400	0.85	+0.2
1,404,003	+		RR42_RS06400	0.85	+0.3
1,404,003	+		RR42_RS06400	0.85	-0.4
1,404,003	+		RR42_RS06400	0.85	-0.2
1,404,004	-		RR42_RS06400	0.85	+0.6
1,404,004	-		RR42_RS06400	0.85	+0.3
1,404,004	-		RR42_RS06400	0.85	+0.4
1,404,004	-		RR42_RS06400	0.85	-1.7
1,404,060	+		RR42_RS06400	0.88	-0.4
1,404,061	-		RR42_RS06400	0.88	+2.5
1,404,314	+		RR42_RS06405	0.18	-0.9
1,404,314	+		RR42_RS06405	0.18	-0.6
1,404,315	-		RR42_RS06405	0.19	+0.1
1,404,440	+		RR42_RS06405	0.53	+1.3
1,404,441	-		RR42_RS06405	0.53	+1.1
1,404,449	+		RR42_RS06405	0.56	-0.0
1,404,502	+		RR42_RS06405	0.70	-1.5
1,404,725	-				+0.2
1,404,762	+				-1.0
1,404,763	-				-0.1
1,404,763	-				-0.5
1,404,826	-		RR42_RS06410	0.14	+0.0
1,404,826	-		RR42_RS06410	0.14	+1.0