Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06295

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,380,241	+				-0.5
1,380,293	+				+0.6
1,380,592	+				+0.1
1,380,593	-				-1.9
1,380,618	+				-1.2
1,380,618	+				+0.7
1,380,618	+				+1.5
1,380,619	-				+0.1
1,380,619	-				-2.4
1,380,619	-				-1.4
1,380,620	+				+0.3
1,380,620	+				-0.4
1,380,621	-				+0.2
1,380,645	-				+1.3
1,380,645	-				-0.6
1,380,793	+		RR42_RS06290	0.23	+0.4
1,380,794	-		RR42_RS06290	0.23	+1.5
1,380,939	+		RR42_RS06290	0.57	+0.4
1,380,939	+		RR42_RS06290	0.57	+0.1
1,380,939	+		RR42_RS06290	0.57	-0.4
1,380,939	+		RR42_RS06290	0.57	-0.1
1,380,939	+		RR42_RS06290	0.57	-0.4
1,380,939	+		RR42_RS06290	0.57	+1.0
1,380,940	-		RR42_RS06290	0.57	+0.4
1,380,940	-		RR42_RS06290	0.57	+0.5
1,380,940	-		RR42_RS06290	0.57	+0.2
1,380,940	-		RR42_RS06290	0.57	+0.7
1,380,940	-		RR42_RS06290	0.57	-0.6
1,380,940	-		RR42_RS06290	0.57	+0.3
1,380,940	-		RR42_RS06290	0.57	+0.2
1,381,084	+				+0.1
1,381,084	+				-0.0
1,381,085	-				+1.4
1,381,099	+				+0.9
1,381,099	+				+1.0
1,381,137	+				-0.5
1,381,137	+				-1.0
1,381,137	+				-1.3
1,381,138	-				+0.1
1,381,138	-				+1.4
1,381,138	-				-0.7
1,381,179	+				+0.0
1,381,180	-				-0.9
1,381,390	+		RR42_RS06295	0.13	-0.5
1,381,390	+		RR42_RS06295	0.13	-0.9
1,381,391	-		RR42_RS06295	0.13	+2.0
1,381,391	-		RR42_RS06295	0.13	+0.2
1,381,450	+		RR42_RS06295	0.16	+0.0
1,381,684	+		RR42_RS06295	0.28	-0.5
1,381,867	+		RR42_RS06295	0.37	+0.8
1,381,867	+		RR42_RS06295	0.37	+0.3
1,381,868	-		RR42_RS06295	0.37	-0.3
1,381,868	-		RR42_RS06295	0.37	-0.2
1,381,868	-		RR42_RS06295	0.37	-2.5
1,381,921	+		RR42_RS06295	0.40	+0.2
1,381,922	-		RR42_RS06295	0.40	+1.5
1,381,922	-		RR42_RS06295	0.40	-1.1
1,381,922	-		RR42_RS06295	0.40	-0.4
1,382,263	+		RR42_RS06295	0.58	-1.3
1,382,264	-		RR42_RS06295	0.58	-1.1
1,382,312	-		RR42_RS06295	0.60	+0.5
1,382,312	-		RR42_RS06295	0.60	-0.7
1,382,312	-		RR42_RS06295	0.60	+0.1
1,382,312	-		RR42_RS06295	0.60	-1.4
1,382,392	+		RR42_RS06295	0.64	-0.1
1,382,392	+		RR42_RS06295	0.64	+1.0
1,382,393	-		RR42_RS06295	0.64	-0.1
1,382,397	-		RR42_RS06295	0.64	-0.5
1,382,679	+		RR42_RS06295	0.79	-0.2
1,382,854	+		RR42_RS06295	0.88	+1.4
1,382,874	+		RR42_RS06295	0.89	-0.5
1,382,874	+		RR42_RS06295	0.89	-0.1
1,382,875	-		RR42_RS06295	0.89	-0.3
1,382,918	+				-0.0
1,382,919	-				-0.1
1,382,957	-				+1.2
1,383,214	+				-0.5
1,383,214	+				+0.5
1,383,214	+				+0.5
1,383,214	+				-0.1
1,383,215	-				+0.7
1,383,215	-				+0.9
1,383,215	-				+0.3
1,383,373	+				-0.2
1,383,373	+				+0.2
1,383,403	+				-0.3
1,383,403	+				+0.6
1,383,403	+				-0.0
1,383,404	-				+1.5
1,383,583	+		RR42_RS06300	0.22	+0.4
1,383,584	-		RR42_RS06300	0.22	+0.6
1,383,715	+		RR42_RS06300	0.31	+0.0
1,383,715	+		RR42_RS06300	0.31	+0.2
1,383,781	+		RR42_RS06300	0.35	-0.9
1,383,968	-		RR42_RS06300	0.48	+0.8
1,383,968	-		RR42_RS06300	0.48	+1.0
1,383,968	-		RR42_RS06300	0.48	-0.3