Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06275

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,374,891	-		RR42_RS06270	0.23	-0.9
1,374,982	-		RR42_RS06270	0.31	+0.1
1,375,223	+		RR42_RS06270	0.52	-0.0
1,375,238	+		RR42_RS06270	0.54	-0.1
1,375,238	+		RR42_RS06270	0.54	+0.3
1,375,239	-		RR42_RS06270	0.54	-1.6
1,375,239	-		RR42_RS06270	0.54	-1.1
1,375,430	+		RR42_RS06270	0.71	-0.4
1,375,430	+		RR42_RS06270	0.71	+1.5
1,375,431	-		RR42_RS06270	0.71	+0.2
1,375,431	-		RR42_RS06270	0.71	-0.6
1,375,734	+				-0.6
1,375,824	-				-1.0
1,375,824	-				+0.4
1,375,824	-				-0.6
1,375,825	+				+0.4
1,375,826	-				-0.9
1,375,890	+				+0.5
1,375,890	+				+0.1
1,375,890	+				-0.0
1,375,890	+				+1.0
1,375,891	-				-1.3
1,375,891	-				+0.1
1,375,948	-		RR42_RS06275	0.18	-0.4
1,375,948	-		RR42_RS06275	0.18	-1.5
1,375,948	-		RR42_RS06275	0.18	-2.0
1,376,061	+		RR42_RS06275	0.39	+0.4
1,376,062	-		RR42_RS06275	0.39	+0.2
1,376,083	+		RR42_RS06275	0.43	+0.4
1,376,083	+		RR42_RS06275	0.43	+1.4
1,376,175	+		RR42_RS06275	0.60	+1.3
1,376,176	-		RR42_RS06275	0.60	+0.1
1,376,176	-		RR42_RS06275	0.60	+3.3
1,376,176	-		RR42_RS06275	0.60	-0.1
1,376,176	-		RR42_RS06275	0.60	+1.6
1,376,428	+				-0.9
1,376,485	-				+0.8
1,376,485	-				+0.7
1,376,559	+				+0.5
1,376,946	+		RR42_RS06280	0.44	+1.7
1,376,947	-		RR42_RS06280	0.44	+0.7
1,377,022	-		RR42_RS06280	0.51	+2.3
1,377,034	+		RR42_RS06280	0.52	+0.2
1,377,034	+		RR42_RS06280	0.52	-0.9
1,377,035	-		RR42_RS06280	0.52	-0.6
1,377,035	-		RR42_RS06280	0.52	-0.3
1,377,193	-		RR42_RS06280	0.67	-0.4
1,377,193	-		RR42_RS06280	0.67	-1.0
1,377,221	+		RR42_RS06280	0.70	+0.2