Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04805

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,068,924	+		RR42_RS04800	0.74	-0.3
1,068,924	+		RR42_RS04800	0.74	+1.5
1,068,967	+		RR42_RS04800	0.77	-1.9
1,068,967	+		RR42_RS04800	0.77	-0.7
1,069,028	+		RR42_RS04800	0.80	+0.3
1,069,028	+		RR42_RS04800	0.80	+0.4
1,069,028	+		RR42_RS04800	0.80	-2.7
1,069,029	-		RR42_RS04800	0.80	+0.2
1,069,029	-		RR42_RS04800	0.80	+1.0
1,069,300	+				+0.4
1,069,331	+				+0.0
1,069,332	-				-0.2
1,069,332	-				+0.1
1,069,359	-				+1.4
1,069,386	+				+0.5
1,069,386	+				-0.0
1,069,391	-				-0.5
1,069,486	+				+0.3
1,069,487	-				-1.6
1,069,487	-				+0.9
1,069,488	+				+1.4
1,069,488	+				+1.1
1,069,490	+				+0.1
1,069,490	+				-0.6
1,069,490	+				-0.3
1,069,491	-				+0.1
1,069,547	+				+1.5
1,069,547	+				+0.7
1,069,547	+				+0.7
1,069,836	+				+0.7
1,069,837	-				+0.0
1,069,837	-				+0.7
1,069,837	-				+0.6
1,069,872	+		RR42_RS04805	0.11	-0.2
1,070,043	+		RR42_RS04805	0.29	-0.1
1,070,044	-		RR42_RS04805	0.29	+0.3
1,070,049	+		RR42_RS04805	0.29	-1.0
1,070,049	+		RR42_RS04805	0.29	-0.3
1,070,050	-		RR42_RS04805	0.30	-0.2
1,070,050	-		RR42_RS04805	0.30	-0.5
1,070,122	-		RR42_RS04805	0.37	-0.3
1,070,248	-		RR42_RS04805	0.51	-0.2
1,070,440	+		RR42_RS04805	0.71	+0.3
1,070,440	+		RR42_RS04805	0.71	-0.3
1,070,441	-		RR42_RS04805	0.71	-1.5
1,070,441	-		RR42_RS04805	0.71	-0.3
1,070,441	-		RR42_RS04805	0.71	-0.1
1,070,442	+		RR42_RS04805	0.71	-0.3
1,070,442	+		RR42_RS04805	0.71	+1.1
1,070,442	+		RR42_RS04805	0.71	+0.2
1,070,442	+		RR42_RS04805	0.71	-0.2
1,070,442	+		RR42_RS04805	0.71	-2.1
1,070,443	-		RR42_RS04805	0.71	-0.8
1,070,443	-		RR42_RS04805	0.71	-0.1
1,070,443	-		RR42_RS04805	0.71	+0.1
1,070,443	-		RR42_RS04805	0.71	-1.7
1,070,443	-		RR42_RS04805	0.71	-0.2
1,070,443	-		RR42_RS04805	0.71	-0.4
1,070,443	-		RR42_RS04805	0.71	+1.1
1,070,443	-		RR42_RS04805	0.71	-1.2
1,070,443	-		RR42_RS04805	0.71	-0.4
1,070,443	-		RR42_RS04805	0.71	+0.4
1,070,443	-		RR42_RS04805	0.71	+1.4
1,070,491	+		RR42_RS04805	0.77	-1.1
1,070,491	+		RR42_RS04805	0.77	+0.8
1,070,492	-		RR42_RS04805	0.77	-0.8
1,070,492	-		RR42_RS04805	0.77	-0.9
1,070,493	+		RR42_RS04805	0.77	+0.4
1,070,494	-		RR42_RS04805	0.77	+1.6
1,070,687	-				+0.2
1,070,773	-				+1.7
1,070,773	-				-0.6
1,070,990	+				-0.9
1,071,306	+				-1.3
1,071,306	+				+0.3
1,071,307	-				-0.3
1,071,307	-				-0.3
1,071,415	+				-0.6
1,071,415	+				-0.3
1,071,415	+				-0.4
1,071,415	+				+0.8
1,071,415	+				-0.3
1,071,416	-				-0.4
1,071,433	-				-0.3
1,071,515	+		RR42_RS04810	0.14	-0.3