Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04745

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,056,202	+		RR42_RS04740	0.79	+0.1
1,056,202	+		RR42_RS04740	0.79	-2.7
1,056,203	-		RR42_RS04740	0.79	-0.4
1,056,203	-		RR42_RS04740	0.79	-0.4
1,056,203	-		RR42_RS04740	0.79	-0.0
1,056,203	-		RR42_RS04740	0.79	+0.8
1,056,203	-		RR42_RS04740	0.79	-1.0
1,056,203	-		RR42_RS04740	0.79	+0.3
1,056,203	-		RR42_RS04740	0.79	-0.8
1,056,461	+				+1.1
1,056,532	+				+0.7
1,056,532	+				+0.5
1,056,533	-				-0.5
1,056,533	-				-0.0
1,056,533	-				+1.8
1,056,552	+				-1.4
1,056,553	-				-0.5
1,056,868	+				+0.3
1,056,869	-				+0.4
1,056,927	+				+0.3
1,056,967	+				-0.2
1,057,028	+				+0.3
1,057,028	+				+1.1
1,057,028	+				-0.9
1,057,028	+				+0.8
1,057,028	+				+1.0
1,057,028	+				+0.4
1,057,028	+				-0.4
1,057,028	+				-0.9
1,057,029	-				-0.8
1,057,029	-				+0.4
1,057,029	-				-0.3
1,057,099	+		RR42_RS04745	0.19	+0.1
1,057,123	+		RR42_RS04745	0.23	+0.7
1,057,123	+		RR42_RS04745	0.23	-0.2
1,057,123	+		RR42_RS04745	0.23	-0.5
1,057,123	+		RR42_RS04745	0.23	-0.6
1,057,123	+		RR42_RS04745	0.23	+0.1
1,057,124	-		RR42_RS04745	0.23	-0.5
1,057,140	+		RR42_RS04745	0.26	-0.3
1,057,141	-		RR42_RS04745	0.26	+0.5
1,057,199	+		RR42_RS04745	0.35	+1.6
1,057,200	-		RR42_RS04745	0.35	+1.1
1,057,230	+		RR42_RS04745	0.39	+1.5
1,057,231	-		RR42_RS04745	0.40	-2.4
1,057,231	-		RR42_RS04745	0.40	-2.9
1,057,268	+		RR42_RS04745	0.45	+0.7
1,057,268	+		RR42_RS04745	0.45	-1.2
1,057,269	-		RR42_RS04745	0.45	-0.1
1,057,269	-		RR42_RS04745	0.45	-0.6
1,057,309	-		RR42_RS04745	0.52	-0.9
1,057,309	-		RR42_RS04745	0.52	-2.1
1,057,309	-		RR42_RS04745	0.52	+0.3
1,057,309	-		RR42_RS04745	0.52	+0.8
1,057,482	-		RR42_RS04745	0.78	-1.3
1,057,592	+				+0.3
1,057,592	+				+1.3
1,057,592	+				-1.9
1,057,592	+				+0.2
1,057,592	+				+0.8
1,057,593	-				-1.5
1,057,593	-				+0.2
1,057,593	-				-1.0
1,057,593	-				+0.4
1,057,593	-				+0.4
1,057,593	-				+0.1
1,057,593	-				-0.5
1,057,673	+				+0.8
1,057,673	+				+1.5
1,057,673	+				+0.8
1,057,674	-				+0.3
1,057,674	-				+0.7
1,057,867	+		RR42_RS04750	0.13	+2.2
1,057,868	-		RR42_RS04750	0.13	-0.3
1,057,946	+		RR42_RS04750	0.21	+0.3
1,057,947	-		RR42_RS04750	0.21	-0.5
1,057,974	-		RR42_RS04750	0.24	+0.5
1,058,140	-		RR42_RS04750	0.40	+0.2
1,058,159	+		RR42_RS04750	0.42	+0.5
1,058,159	+		RR42_RS04750	0.42	+0.4
1,058,159	+		RR42_RS04750	0.42	-0.4
1,058,159	+		RR42_RS04750	0.42	+1.6
1,058,159	+		RR42_RS04750	0.42	+0.2
1,058,159	+		RR42_RS04750	0.42	+2.4
1,058,160	-		RR42_RS04750	0.42	+0.4
1,058,160	-		RR42_RS04750	0.42	-0.5
1,058,160	-		RR42_RS04750	0.42	-0.2
1,058,160	-		RR42_RS04750	0.42	+0.1
1,058,160	-		RR42_RS04750	0.42	+0.4
1,058,247	-		RR42_RS04750	0.51	+0.4
1,058,247	-		RR42_RS04750	0.51	-0.6
1,058,273	+		RR42_RS04750	0.53	-0.8
1,058,274	-		RR42_RS04750	0.53	+0.2
1,058,396	+		RR42_RS04750	0.66	-0.0
1,058,396	+		RR42_RS04750	0.66	+0.1
1,058,396	+		RR42_RS04750	0.66	-1.1
1,058,396	+		RR42_RS04750	0.66	+0.1
1,058,396	+		RR42_RS04750	0.66	+1.8
1,058,396	+		RR42_RS04750	0.66	+0.3
1,058,397	-		RR42_RS04750	0.66	+0.6
1,058,400	+		RR42_RS04750	0.66	+0.2
1,058,400	+		RR42_RS04750	0.66	+0.1
1,058,401	-		RR42_RS04750	0.66	-0.6
1,058,401	-		RR42_RS04750	0.66	+0.7
1,058,401	-		RR42_RS04750	0.66	+0.3
1,058,488	-		RR42_RS04750	0.75	+0.5
1,058,597	+		RR42_RS04750	0.86	+0.6