Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04530

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,010,505	+				-0.2
1,010,505	+				+1.3
1,010,506	-				-0.0
1,010,605	+				+0.3
1,010,606	-				+0.1
1,010,658	-				-1.0
1,010,772	+		RR42_RS04525	0.24	-1.5
1,011,046	+				-0.0
1,011,047	-				-0.3
1,011,088	+				-0.2
1,011,176	-				+0.8
1,011,296	+				-0.5
1,011,441	-				+0.5
1,011,455	-				+0.6
1,011,579	+		RR42_RS04530	0.19	+0.1
1,011,579	+		RR42_RS04530	0.19	+0.8
1,011,580	-		RR42_RS04530	0.19	+1.2
1,011,580	-		RR42_RS04530	0.19	+0.0
1,011,699	+		RR42_RS04530	0.28	-0.5
1,011,700	-		RR42_RS04530	0.28	+0.7
1,011,700	-		RR42_RS04530	0.28	-0.6
1,011,700	-		RR42_RS04530	0.28	-0.9
1,011,700	-		RR42_RS04530	0.28	-0.9
1,011,848	+		RR42_RS04530	0.39	-0.1
1,011,929	-		RR42_RS04530	0.45	-0.7
1,011,964	-		RR42_RS04530	0.48	+0.6
1,011,964	-		RR42_RS04530	0.48	+0.1
1,012,173	+		RR42_RS04530	0.64	+0.8
1,012,174	-		RR42_RS04530	0.64	-0.6
1,012,174	-		RR42_RS04530	0.64	+0.3
1,012,251	+		RR42_RS04530	0.70	+0.2
1,012,251	+		RR42_RS04530	0.70	-0.9
1,012,252	-		RR42_RS04530	0.70	-0.1
1,012,252	-		RR42_RS04530	0.70	-0.3
1,012,252	-		RR42_RS04530	0.70	+0.2
1,012,442	+		RR42_RS04530	0.84	+0.3
1,012,686	+				+0.8
1,012,686	+				-0.3
1,012,686	+				-0.0
1,012,687	-				+1.7
1,012,687	-				+0.4
1,012,687	-				+0.3
1,012,727	-				+0.0
1,012,727	-				-1.7
1,012,814	+		RR42_RS04535	0.10	+2.1
1,012,814	+		RR42_RS04535	0.10	-0.7
1,012,814	+		RR42_RS04535	0.10	-0.3
1,012,815	-		RR42_RS04535	0.11	-0.1
1,012,815	-		RR42_RS04535	0.11	-0.4
1,012,923	+		RR42_RS04535	0.22	-0.7
1,013,384	-		RR42_RS04535	0.74	+0.1
1,013,593	+				-0.4