Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04505

Experiment: R2A with A22 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with A22 0.01 mg/ml
1,005,021	+		RR42_RS04495	0.60	-0.5
1,005,022	-		RR42_RS04495	0.60	+0.5
1,005,085	-		RR42_RS04495	0.73	+1.1
1,005,097	-		RR42_RS04495	0.75	-1.6
1,005,114	+		RR42_RS04495	0.79	+0.5
1,005,301	+				-0.1
1,005,301	+				+0.0
1,005,302	-				+0.1
1,005,302	-				+0.4
1,005,320	+				+0.4
1,005,729	+				+1.0
1,005,729	+				-0.5
1,005,736	+				+0.9
1,005,736	+				-0.3
1,007,021	+				+0.4
1,007,050	+				-1.0
1,007,057	+				-0.7
1,007,149	+				-1.2
1,007,349	+		RR42_RS04510	0.21	-1.7
1,007,349	+		RR42_RS04510	0.21	-0.8
1,007,349	+		RR42_RS04510	0.21	-0.1
1,007,349	+		RR42_RS04510	0.21	-0.5
1,007,349	+		RR42_RS04510	0.21	-0.9
1,007,349	+		RR42_RS04510	0.21	-0.5
1,007,382	+		RR42_RS04510	0.24	-1.2
1,007,663	+		RR42_RS04510	0.44	-0.4
1,007,663	+		RR42_RS04510	0.44	+0.2
1,007,670	+		RR42_RS04510	0.45	+0.4
1,007,670	+		RR42_RS04510	0.45	-0.0
1,007,703	+		RR42_RS04510	0.47	-0.6
1,007,703	+		RR42_RS04510	0.47	+0.1
1,007,829	+		RR42_RS04510	0.56	-0.8
1,007,831	+		RR42_RS04510	0.56	-0.9
1,007,831	+		RR42_RS04510	0.56	+0.1
1,007,831	+		RR42_RS04510	0.56	+1.1
1,007,841	+		RR42_RS04510	0.57	-1.7