Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1109

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,242,023	+		Pf1N1B4_1108	0.41	-1.2
1,242,023	+		Pf1N1B4_1108	0.41	-0.6
1,242,023	+		Pf1N1B4_1108	0.41	+0.2
1,242,024	-		Pf1N1B4_1108	0.41	-0.6
1,242,024	-		Pf1N1B4_1108	0.41	+0.1
1,242,024	-		Pf1N1B4_1108	0.41	+0.4
1,242,050	+		Pf1N1B4_1108	0.43	+0.3
1,242,050	+		Pf1N1B4_1108	0.43	+1.8
1,242,051	-		Pf1N1B4_1108	0.43	-0.3
1,242,051	-		Pf1N1B4_1108	0.43	+1.9
1,242,051	-		Pf1N1B4_1108	0.43	+1.4
1,242,051	-		Pf1N1B4_1108	0.43	-0.4
1,242,051	-		Pf1N1B4_1108	0.43	+0.1
1,242,051	-		Pf1N1B4_1108	0.43	-0.1
1,242,051	-				-0.1
1,242,083	+		Pf1N1B4_1108	0.45	+1.4
1,242,084	-		Pf1N1B4_1108	0.45	-2.6
1,242,125	+		Pf1N1B4_1108	0.48	+0.5
1,242,125	+		Pf1N1B4_1108	0.48	-0.6
1,242,125	+		Pf1N1B4_1108	0.48	+1.1
1,242,125	+		Pf1N1B4_1108	0.48	+0.4
1,242,126	-		Pf1N1B4_1108	0.48	+0.4
1,242,126	-		Pf1N1B4_1108	0.48	-1.7
1,242,126	-		Pf1N1B4_1108	0.48	+0.9
1,242,126	-		Pf1N1B4_1108	0.48	+1.1
1,242,126	-		Pf1N1B4_1108	0.48	-1.1
1,242,251	+		Pf1N1B4_1108	0.58	-1.0
1,242,251	+		Pf1N1B4_1108	0.58	+0.1
1,242,251	+		Pf1N1B4_1108	0.58	+0.1
1,242,251	+		Pf1N1B4_1108	0.58	-1.9
1,242,252	-		Pf1N1B4_1108	0.58	+0.9
1,242,252	-		Pf1N1B4_1108	0.58	-0.9
1,242,377	+		Pf1N1B4_1108	0.67	-0.6
1,242,377	+		Pf1N1B4_1108	0.67	+0.1
1,242,377	+		Pf1N1B4_1108	0.67	+1.4
1,242,378	-		Pf1N1B4_1108	0.67	-0.4
1,242,545	+		Pf1N1B4_1108	0.79	-1.1
1,242,545	+		Pf1N1B4_1108	0.79	+1.0
1,242,545	+		Pf1N1B4_1108	0.79	-0.2
1,242,653	+		Pf1N1B4_1108	0.87	-0.6
1,242,678	+		Pf1N1B4_1108	0.89	-0.3
1,242,678	+		Pf1N1B4_1108	0.89	+0.4
1,242,678	+		Pf1N1B4_1108	0.89	-0.9
1,242,679	-		Pf1N1B4_1108	0.89	-1.0
1,242,679	-		Pf1N1B4_1108	0.89	+0.1
1,242,679	-		Pf1N1B4_1108	0.89	-1.1
1,242,679	-		Pf1N1B4_1108	0.89	+1.0
1,242,679	-		Pf1N1B4_1108	0.89	-0.3
1,242,679	-		Pf1N1B4_1108	0.89	-2.0
1,242,680	+		Pf1N1B4_1108	0.89	-0.4
1,242,680	+		Pf1N1B4_1108	0.89	-0.1
1,242,744	+				-1.6
1,242,758	+				-0.6
1,242,758	+				-0.6
1,242,759	-				-0.3
1,242,800	+				+1.4
1,242,834	+				+0.9
1,242,834	+				+0.2
1,242,834	+				-0.6
1,242,834	+				-0.4
1,242,834	+				+0.4
1,242,834	+				+0.9
1,242,834	+				-0.7
1,242,835	-				+1.0
1,242,835	-				+0.3
1,242,835	-				+0.4
1,242,835	-				-0.6
1,242,840	+				+2.0
1,242,840	+				+1.9
1,242,840	+				+0.3
1,242,840	+				+0.6
1,242,840	+				-1.0
1,242,840	+				+0.4
1,242,841	-				-1.0
1,242,841	-				+1.4
1,242,841	-				+0.7
1,242,854	-				-0.1
1,242,854	-				-1.1
1,242,854	-				-0.3
1,242,915	+				+0.1
1,242,982	-				+0.4
1,242,982	-				+0.6
1,242,990	+				+1.4
1,242,990	+				-0.3
1,243,005	+				+0.0
1,243,005	+				+0.4
1,243,005	+				+0.7
1,243,005	+				-2.5
1,243,006	-				+0.4
1,243,006	-				+0.2
1,243,006	-				-1.0
1,243,006	-				-0.1
1,243,006	-				+0.6
1,243,006	-				-0.1
1,243,026	+				+0.4
1,243,026	+				+0.6
1,243,027	-				+0.1
1,243,027	-				+0.6
1,243,027	-				+0.7
1,243,042	-				+0.9
1,243,065	+				-0.2
1,243,065	+				+0.6
1,243,066	-				+0.4
1,243,066	-				-0.6
1,243,078	+				+0.2
1,243,101	+				+0.1
1,243,173	+		Pf1N1B4_1109	0.13	+0.2
1,243,350	+		Pf1N1B4_1109	0.25	+1.0
1,243,350	+		Pf1N1B4_1109	0.25	-0.2
1,243,351	-		Pf1N1B4_1109	0.25	-0.1
1,243,351	-		Pf1N1B4_1109	0.25	-0.2
1,243,425	+				-1.1
1,243,425	+		Pf1N1B4_1109	0.30	-0.6
1,243,425	+		Pf1N1B4_1109	0.30	-0.4
1,243,425	+		Pf1N1B4_1109	0.30	-0.2
1,243,425	+		Pf1N1B4_1109	0.30	-0.9
1,243,426	-		Pf1N1B4_1109	0.30	+0.9
1,243,426	-		Pf1N1B4_1109	0.30	+1.0
1,243,605	+		Pf1N1B4_1109	0.42	+0.1
1,244,064	+		Pf1N1B4_1109	0.74	+0.3
1,244,064	+		Pf1N1B4_1109	0.74	+0.4
1,244,064	+		Pf1N1B4_1109	0.74	-0.4
1,244,064	+		Pf1N1B4_1109	0.74	-0.3
1,244,064	+		Pf1N1B4_1109	0.74	-0.9
1,244,065	-		Pf1N1B4_1109	0.74	+1.2
1,244,065	-		Pf1N1B4_1109	0.74	-1.0
1,244,409	+				-0.1
1,244,409	+				-0.1
1,244,409	+				+0.4
1,244,409	+				-1.0
1,244,409	+				+0.4
1,244,409	+				-0.1
1,244,409	+				-1.4
1,244,409	+				-0.4
1,244,409	+				+1.2
1,244,409	+				-0.4
1,244,409	+				-0.6
1,244,409	+				+0.3
1,244,410	-				+0.4
1,244,410	-				-0.5
1,244,410	-				-0.6
1,244,410	-				-1.4
1,244,410	-				+0.0
1,244,410	-				+1.2
1,244,410	-				-0.1
1,244,498	+				+0.7
1,244,540	+				-0.6
1,244,591	+		Pf1N1B4_1110	0.10	-0.1
1,244,591	+		Pf1N1B4_1110	0.10	-0.6
1,244,592	-		Pf1N1B4_1110	0.10	+0.5
1,244,592	-		Pf1N1B4_1110	0.10	-0.1
1,244,592	-		Pf1N1B4_1110	0.10	+0.2
1,244,777	+		Pf1N1B4_1110	0.31	+0.4
1,244,778	-		Pf1N1B4_1110	0.31	-2.1
1,244,814	-				+1.4
1,244,843	+		Pf1N1B4_1110	0.38	-0.5
1,244,844	-		Pf1N1B4_1110	0.38	+0.5
1,244,988	-		Pf1N1B4_1110	0.54	+0.4
1,244,988	-		Pf1N1B4_1110	0.54	-1.6
1,244,988	-		Pf1N1B4_1110	0.54	-1.4
1,245,008	-		Pf1N1B4_1110	0.56	-1.6
1,245,068	+		Pf1N1B4_1110	0.63	-1.0
1,245,069	-		Pf1N1B4_1110	0.63	-0.9
1,245,069	-		Pf1N1B4_1110	0.63	-1.4
1,245,122	+		Pf1N1B4_1110	0.69	+0.3
1,245,123	-		Pf1N1B4_1110	0.69	+0.6
1,245,152	-		Pf1N1B4_1110	0.72	-0.3
1,245,311	+		Pf1N1B4_1110	0.89	-0.6
1,245,311	+		Pf1N1B4_1110	0.89	-0.1
1,245,427	-				-2.5