Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03028

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
3,182,113	-		CCNA_03027	0.35	-0.3
3,182,113	-		CCNA_03027	0.35	+0.4
3,182,147	+		CCNA_03027	0.38	+0.4
3,182,155	-		CCNA_03027	0.38	+0.5
3,182,167	-		CCNA_03027	0.39	+1.1
3,182,174	-		CCNA_03027	0.40	-2.6
3,182,189	-		CCNA_03027	0.41	+0.6
3,182,225	-		CCNA_03027	0.43	+0.3
3,182,272	+		CCNA_03027	0.47	-0.0
3,182,317	+		CCNA_03027	0.50	-0.5
3,182,317	+		CCNA_03027	0.50	+0.1
3,182,317	+		CCNA_03027	0.50	-0.5
3,182,317	+		CCNA_03027	0.50	-0.6
3,182,325	-		CCNA_03027	0.51	+0.2
3,182,325	-		CCNA_03027	0.51	-0.2
3,182,352	+		CCNA_03027	0.53	-0.1
3,182,377	+		CCNA_03027	0.55	+0.3
3,182,382	+		CCNA_03027	0.55	+1.7
3,182,385	-		CCNA_03027	0.55	-0.1
3,182,385	-		CCNA_03027	0.55	-1.0
3,182,393	+		CCNA_03027	0.56	+0.2
3,182,393	+		CCNA_03027	0.56	+0.7
3,182,393	+		CCNA_03027	0.56	-0.5
3,182,393	+		CCNA_03027	0.56	-0.9
3,182,393	+		CCNA_03027	0.56	+0.0
3,182,401	-		CCNA_03027	0.57	-1.1
3,182,401	-		CCNA_03027	0.57	-0.1
3,182,401	-		CCNA_03027	0.57	+0.2
3,182,401	-		CCNA_03027	0.57	-0.3
3,182,401	-		CCNA_03027	0.57	-0.4
3,182,401	-		CCNA_03027	0.57	+0.2
3,182,401	-		CCNA_03027	0.57	-0.8
3,182,401	-		CCNA_03027	0.57	+2.3
3,182,410	+		CCNA_03027	0.57	-1.7
3,182,410	+		CCNA_03027	0.57	-0.8
3,182,418	-		CCNA_03027	0.58	-2.1
3,182,418	-		CCNA_03027	0.58	-1.2
3,182,418	-		CCNA_03027	0.58	+0.2
3,182,418	-		CCNA_03027	0.58	-1.2
3,182,451	-		CCNA_03027	0.60	-0.8
3,182,460	+		CCNA_03027	0.61	-0.8
3,182,509	-		CCNA_03027	0.65	-1.2
3,182,511	-		CCNA_03027	0.65	+1.1
3,182,511	-		CCNA_03027	0.65	+0.2
3,182,512	+		CCNA_03027	0.65	-0.9
3,182,520	-		CCNA_03027	0.65	-0.6
3,182,554	+		CCNA_03027	0.68	-2.0
3,182,564	+		CCNA_03027	0.69	-0.2
3,182,572	-		CCNA_03027	0.69	-1.2
3,182,572	-		CCNA_03027	0.69	+0.9
3,182,582	-		CCNA_03027	0.70	-3.3
3,182,589	+		CCNA_03027	0.71	-0.5
3,182,616	+				+0.3
3,182,658	+		CCNA_03027	0.76	-1.4
3,182,667	-		CCNA_03027	0.76	-0.9
3,182,714	-		CCNA_03027	0.80	+0.3
3,182,738	+		CCNA_03027	0.82	+1.1
3,182,756	+		CCNA_03027	0.83	+1.1
3,182,761	+		CCNA_03027	0.83	-2.1
3,182,813	-		CCNA_03027	0.87	+0.9
3,182,817	+		CCNA_03027	0.88	-0.4
3,182,825	-		CCNA_03027	0.88	+0.7
3,182,867	-				+1.0
3,182,872	+				-0.0
3,182,873	+				+0.5
3,182,881	-				+1.0
3,182,926	+				+0.5
3,182,929	-				+0.7
3,182,941	+				+0.5
3,182,944	-				+0.3
3,182,949	-				+1.0
3,182,949	-				+0.3
3,182,949	-				-0.1
3,182,964	+				+0.8
3,182,972	-				+1.2
3,183,013	+				-1.7
3,183,024	+				+0.0
3,183,032	+				+0.7
3,183,102	+				+0.3
3,183,110	-				+1.1
3,183,110	-				+1.0
3,183,115	-				+3.0
3,183,115	-				+1.3
3,183,141	-				+0.3
3,183,154	+				-2.8
3,183,187	-				-1.0
3,183,196	-		CCNA_03028	0.10	-1.9
3,183,214	+		CCNA_03028	0.12	-0.1
3,183,214	-		CCNA_03028	0.12	-2.0
3,183,232	-		CCNA_03028	0.14	-2.8
3,183,232	-		CCNA_03028	0.14	-2.0
3,183,237	+		CCNA_03028	0.15	-1.9
3,183,313	-		CCNA_03028	0.24	-2.8
3,183,327	+		CCNA_03028	0.25	-0.5
3,183,327	+		CCNA_03028	0.25	-0.9
3,183,327	+		CCNA_03028	0.25	+0.3
3,183,327	+		CCNA_03028	0.25	-0.1
3,183,327	+		CCNA_03028	0.25	-2.8
3,183,335	-		CCNA_03028	0.26	-0.7
3,183,335	-		CCNA_03028	0.26	-2.8
3,183,335	-		CCNA_03028	0.26	-1.5
3,183,335	-		CCNA_03028	0.26	+0.3
3,183,335	-		CCNA_03028	0.26	-3.3
3,183,335	-		CCNA_03028	0.26	-2.5
3,183,335	-		CCNA_03028	0.26	-4.7
3,183,405	+		CCNA_03028	0.35	-1.8
3,183,452	-		CCNA_03028	0.40	-1.5
3,183,454	-		CCNA_03028	0.40	-2.2
3,183,490	-		CCNA_03028	0.45	-1.0
3,183,516	-		CCNA_03028	0.48	+1.2
3,183,516	-		CCNA_03028	0.48	-3.1
3,183,542	-		CCNA_03028	0.51	-2.5
3,183,543	-		CCNA_03028	0.51	-0.5
3,183,547	+		CCNA_03028	0.51	-1.4
3,183,547	+		CCNA_03028	0.51	-1.2
3,183,554	+		CCNA_03028	0.52	-2.0
3,183,555	-		CCNA_03028	0.52	-3.2
3,183,555	-		CCNA_03028	0.52	-0.4
3,183,555	-		CCNA_03028	0.52	-2.9
3,183,583	-		CCNA_03028	0.56	-2.3
3,183,648	+		CCNA_03028	0.63	-2.5
3,183,656	-		CCNA_03028	0.64	-0.9
3,183,657	+		CCNA_03028	0.64	-1.8
3,183,665	-		CCNA_03028	0.65	-3.4
3,183,665	-		CCNA_03028	0.65	-2.2
3,183,665	-		CCNA_03028	0.65	-2.5
3,183,665	-		CCNA_03028	0.65	-2.1
3,183,665	-		CCNA_03028	0.65	-1.0
3,183,674	-		CCNA_03028	0.66	-2.4
3,183,830	-		CCNA_03028	0.85	-3.4
3,183,831	-		CCNA_03028	0.85	-1.5
3,183,838	+		CCNA_03028	0.85	-2.5
3,183,838	-		CCNA_03028	0.85	-1.9
3,183,850	+		CCNA_03028	0.87	+0.7
3,183,850	+		CCNA_03028	0.87	-0.1
3,183,850	+		CCNA_03028	0.87	-2.2
3,183,858	-		CCNA_03028	0.88	-0.7
3,183,858	-		CCNA_03028	0.88	-2.6
3,183,874	-		CCNA_03028	0.90	-1.7
3,183,912	-				+0.7
3,183,912	-				-3.8
3,183,953	-				+0.1
3,183,964	+				-2.5
3,183,967	-				+0.8
3,184,688	+				+1.4
3,184,706	-				+0.3
3,184,706	-				-1.3
3,184,728	+				+1.7
3,184,770	+				+1.1
3,184,770	+				+2.1
3,184,780	-				+1.4
3,184,802	+				+1.2
3,184,802	+				+1.1
3,184,802	+				+0.6
3,184,815	+				+0.7
3,184,869	+				+1.6
3,184,886	+				+1.5
3,184,929	+		CCNA_03030	0.11	+0.9