Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02236

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
2,384,001	+		CCNA_02235	0.26	-0.1
2,384,001	+		CCNA_02235	0.26	-2.5
2,384,009	-		CCNA_02235	0.27	-1.5
2,384,061	-		CCNA_02235	0.31	-1.7
2,384,092	+		CCNA_02235	0.33	+0.1
2,384,092	+		CCNA_02235	0.33	-0.7
2,384,142	+		CCNA_02235	0.37	-1.5
2,384,142	+		CCNA_02235	0.37	-0.1
2,384,147	+		CCNA_02235	0.37	-0.1
2,384,155	-		CCNA_02235	0.38	+1.8
2,384,155	-		CCNA_02235	0.38	+1.7
2,384,155	-		CCNA_02235	0.38	+2.1
2,384,160	-		CCNA_02235	0.38	+1.6
2,384,163	+		CCNA_02235	0.38	+0.7
2,384,178	-		CCNA_02235	0.40	-0.6
2,384,190	+		CCNA_02235	0.40	-2.8
2,384,197	+		CCNA_02235	0.41	-1.7
2,384,197	+		CCNA_02235	0.41	-2.0
2,384,202	+		CCNA_02235	0.41	-1.0
2,384,205	-		CCNA_02235	0.42	-0.9
2,384,205	-		CCNA_02235	0.42	-0.6
2,384,210	-		CCNA_02235	0.42	-0.6
2,384,211	-		CCNA_02235	0.42	-1.8
2,384,301	-		CCNA_02235	0.49	-0.9
2,384,390	+		CCNA_02235	0.55	-0.1
2,384,410	+		CCNA_02235	0.57	+0.3
2,384,410	-		CCNA_02235	0.57	+1.2
2,384,415	+		CCNA_02235	0.57	-1.8
2,384,418	-		CCNA_02235	0.57	-1.5
2,384,423	-		CCNA_02235	0.58	-1.1
2,384,428	-		CCNA_02235	0.58	-1.2
2,384,428	-		CCNA_02235	0.58	-1.4
2,384,430	+		CCNA_02235	0.58	+0.3
2,384,438	-		CCNA_02235	0.59	+1.0
2,384,446	-		CCNA_02235	0.59	-2.0
2,384,457	+		CCNA_02235	0.60	-1.0
2,384,457	+		CCNA_02235	0.60	+0.4
2,384,464	+		CCNA_02235	0.61	-0.6
2,384,477	-		CCNA_02235	0.62	-2.0
2,384,487	-		CCNA_02235	0.62	-0.9
2,384,487	-		CCNA_02235	0.62	-0.0
2,384,487	-		CCNA_02235	0.62	-1.9
2,384,522	+		CCNA_02235	0.65	-1.5
2,384,536	+		CCNA_02235	0.66	-1.3
2,384,560	+		CCNA_02235	0.68	-1.4
2,384,579	-		CCNA_02235	0.69	-2.2
2,384,602	-		CCNA_02235	0.71	+1.7
2,384,628	-		CCNA_02235	0.73	-1.2
2,384,646	-		CCNA_02235	0.74	-0.9
2,384,668	+		CCNA_02235	0.76	+0.8
2,384,668	+		CCNA_02235	0.76	-1.8
2,384,674	+		CCNA_02235	0.76	+1.4
2,384,676	-		CCNA_02235	0.76	-0.8
2,384,682	-		CCNA_02235	0.77	-1.4
2,384,682	-		CCNA_02235	0.77	-1.1
2,384,682	-		CCNA_02235	0.77	-0.7
2,384,724	+		CCNA_02235	0.80	-3.6
2,384,732	-		CCNA_02235	0.80	-2.5
2,384,732	-		CCNA_02235	0.80	-1.9
2,384,751	+		CCNA_02235	0.82	+0.4
2,384,767	+		CCNA_02235	0.83	-0.1
2,384,775	-		CCNA_02235	0.84	-1.5
2,384,775	-		CCNA_02235	0.84	-0.8
2,384,775	-		CCNA_02235	0.84	+0.2
2,384,793	-		CCNA_02235	0.85	-0.5
2,384,798	-		CCNA_02235	0.85	-2.1
2,384,891	+				-2.0
2,384,891	-				-1.4
2,384,916	-				-1.1
2,384,960	-				-1.6
2,384,986	-				-0.4
2,385,012	+				-3.4
2,385,012	+				-0.8
2,385,020	-				-0.2
2,385,020	-				+0.6
2,385,030	-				+0.6
2,385,037	-				-0.4
2,385,039	+				-0.4
2,385,042	-				-2.7
2,385,060	+				-0.8
2,385,161	-		CCNA_02236	0.18	-2.0
2,385,161	-		CCNA_02236	0.18	+0.6
2,385,195	+		CCNA_02236	0.21	-2.0
2,385,205	+		CCNA_02236	0.23	-0.6
2,385,213	-		CCNA_02236	0.23	-3.3
2,385,213	-		CCNA_02236	0.23	+1.0
2,385,273	+		CCNA_02236	0.30	-0.6
2,385,285	-		CCNA_02236	0.31	-0.9
2,385,285	-		CCNA_02236	0.31	-1.8
2,385,292	+		CCNA_02236	0.32	-0.0
2,385,292	+		CCNA_02236	0.32	-1.4
2,385,298	+		CCNA_02236	0.33	-2.2
2,385,306	-		CCNA_02236	0.34	-1.6
2,385,316	-		CCNA_02236	0.35	-0.2
2,385,350	+		CCNA_02236	0.39	-1.0
2,385,372	-		CCNA_02236	0.41	-1.6
2,385,374	-		CCNA_02236	0.41	-0.4
2,385,382	-		CCNA_02236	0.42	-1.3
2,385,411	+		CCNA_02236	0.45	+0.2
2,385,430	-		CCNA_02236	0.47	-1.9
2,385,520	-		CCNA_02236	0.57	-1.1
2,385,545	+		CCNA_02236	0.60	+1.4
2,385,548	-		CCNA_02236	0.60	-1.7
2,385,553	-		CCNA_02236	0.61	+0.2
2,385,635	-		CCNA_02236	0.70	-0.6
2,385,649	+		CCNA_02236	0.72	-0.7
2,385,709	-		CCNA_02236	0.78	+0.9
2,385,711	+		CCNA_02236	0.78	-2.2
2,385,726	+		CCNA_02236	0.80	-0.1
2,385,733	+		CCNA_02236	0.81	+3.4
2,385,753	+		CCNA_02236	0.83	-1.0
2,385,802	-				+2.4
2,385,813	+				+0.9
2,385,828	-				-1.3
2,385,842	+				-0.6
2,385,847	+				-2.0
2,385,850	-				+0.4
2,385,856	+				-1.7
2,385,895	+				-0.5
2,385,905	-				-1.1
2,386,018	+				+1.4
2,386,018	+				+0.1
2,386,018	+				+0.8
2,386,018	+				+1.4
2,386,026	-				-0.9
2,386,029	+				+0.4
2,386,050	-				-0.5
2,386,068	+				+0.4
2,386,098	+				+0.4
2,386,124	+				+0.4
2,386,132	-				-1.7
2,386,141	+				+1.6
2,386,165	-				-1.4
2,386,172	-				-0.0
2,386,181	+				+1.0
2,386,211	-		CCNA_02237	0.11	-2.6
2,386,226	+		CCNA_02237	0.11	+1.0
2,386,231	+		CCNA_02237	0.12	+0.4
2,386,231	+		CCNA_02237	0.12	+0.0
2,386,239	-		CCNA_02237	0.12	-1.1
2,386,260	-		CCNA_02237	0.13	-0.4
2,386,267	+		CCNA_02237	0.13	+2.6
2,386,288	+		CCNA_02237	0.14	-0.5
2,386,307	+		CCNA_02237	0.15	+0.6
2,386,315	-		CCNA_02237	0.15	-0.9
2,386,317	+		CCNA_02237	0.15	-0.7
2,386,335	+		CCNA_02237	0.16	+0.9
2,386,343	-		CCNA_02237	0.17	-1.4
2,386,405	+		CCNA_02237	0.19	+0.4
2,386,407	+		CCNA_02237	0.20	-0.4
2,386,413	+		CCNA_02237	0.20	+0.2
2,386,415	-		CCNA_02237	0.20	+0.4
2,386,438	+		CCNA_02237	0.21	+0.2
2,386,443	+		CCNA_02237	0.21	-0.7
2,386,446	-		CCNA_02237	0.21	-0.5
2,386,454	+		CCNA_02237	0.22	-0.0
2,386,469	-		CCNA_02237	0.22	-3.0
2,386,484	-		CCNA_02237	0.23	+1.3
2,386,489	+		CCNA_02237	0.23	+1.1
2,386,491	-		CCNA_02237	0.23	-1.0
2,386,520	+		CCNA_02237	0.25	+1.3
2,386,528	-		CCNA_02237	0.25	-1.0
2,386,528	-		CCNA_02237	0.25	-1.6
2,386,544	+		CCNA_02237	0.26	+1.1
2,386,549	+		CCNA_02237	0.26	-2.0
2,386,549	+		CCNA_02237	0.26	+0.6
2,386,557	-		CCNA_02237	0.26	-1.3
2,386,557	-		CCNA_02237	0.26	-0.2
2,386,583	+		CCNA_02237	0.27	-1.7
2,386,601	+		CCNA_02237	0.28	+0.7
2,386,616	-		CCNA_02237	0.29	-2.3
2,386,622	-		CCNA_02237	0.29	-1.7
2,386,642	-		CCNA_02237	0.30	+0.1
2,386,738	+		CCNA_02237	0.34	+1.0
2,386,738	+		CCNA_02237	0.34	+0.7
2,386,738	+		CCNA_02237	0.34	+0.7
2,386,746	-		CCNA_02237	0.35	-1.0
2,386,746	-		CCNA_02237	0.35	-0.6
2,386,746	-		CCNA_02237	0.35	-1.4
2,386,746	-		CCNA_02237	0.35	+0.3
2,386,786	+		CCNA_02237	0.37	+0.4
2,386,793	+		CCNA_02237	0.37	+1.6
2,386,819	+		CCNA_02237	0.38	+1.5
2,386,819	+		CCNA_02237	0.38	+1.1
2,386,819	+		CCNA_02237	0.38	-0.6
2,386,819	+		CCNA_02237	0.38	+1.3
2,386,819	+		CCNA_02237	0.38	+1.0
2,386,819	-		CCNA_02237	0.38	-2.0
2,386,827	-		CCNA_02237	0.38	-1.0
2,386,827	-		CCNA_02237	0.38	+0.7
2,386,827	-		CCNA_02237	0.38	-1.7
2,386,827	-		CCNA_02237	0.38	-0.9
2,386,827	-		CCNA_02237	0.38	+0.1
2,386,827	-		CCNA_02237	0.38	+0.3
2,386,827	-		CCNA_02237	0.38	-2.5
2,386,827	-		CCNA_02237	0.38	-2.4
2,386,852	+		CCNA_02237	0.40	+0.4
2,386,860	-		CCNA_02237	0.40	-1.0
2,386,860	-		CCNA_02237	0.40	+0.1
2,386,904	+		CCNA_02237	0.42	+1.4
2,386,904	+		CCNA_02237	0.42	+1.4
2,386,904	-		CCNA_02237	0.42	-0.7