Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26655 and BPHYT_RS26660 are separated by 105 nucleotides BPHYT_RS26660 and BPHYT_RS26665 are separated by 62 nucleotides BPHYT_RS26665 and BPHYT_RS26670 are separated by 2 nucleotides
BPHYT_RS26655: BPHYT_RS26655 - 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase, at 1,547,735 to 1,550,029
_RS26655
BPHYT_RS26660: BPHYT_RS26660 - precorrin-4 C11-methyltransferase, at 1,550,135 to 1,550,860
_RS26660
BPHYT_RS26665: BPHYT_RS26665 - cobalt-precorrin-6X reductase, at 1,550,923 to 1,551,645
_RS26665
BPHYT_RS26670: BPHYT_RS26670 - Cobalt-precorrin-5B C(1)-methyltransferase, at 1,551,648 to 1,552,745
_RS26670
Position (kb)
1550
1551 Strain fitness (log2 ratio)
-1
0
1 at 1549.170 kb on + strand, within BPHYT_RS26655 at 1549.651 kb on + strand, within BPHYT_RS26655 at 1549.657 kb on + strand, within BPHYT_RS26655 at 1549.788 kb on - strand, within BPHYT_RS26655 at 1550.325 kb on + strand, within BPHYT_RS26660 at 1550.336 kb on + strand, within BPHYT_RS26660 at 1550.480 kb on - strand, within BPHYT_RS26660 at 1550.846 kb on - strand at 1551.085 kb on + strand, within BPHYT_RS26665 at 1551.200 kb on - strand, within BPHYT_RS26665 at 1551.230 kb on + strand, within BPHYT_RS26665 at 1551.257 kb on - strand, within BPHYT_RS26665 at 1551.479 kb on + strand, within BPHYT_RS26665 at 1551.489 kb on + strand, within BPHYT_RS26665 at 1551.567 kb on + strand, within BPHYT_RS26665 at 1551.568 kb on - strand, within BPHYT_RS26665 at 1551.569 kb on + strand, within BPHYT_RS26665 at 1551.570 kb on - strand, within BPHYT_RS26665
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 1,549,170 + BPHYT_RS26655 0.63 +0.3 1,549,651 + BPHYT_RS26655 0.83 -0.1 1,549,657 + BPHYT_RS26655 0.84 -0.2 1,549,788 - BPHYT_RS26655 0.89 +1.1 1,550,325 + BPHYT_RS26660 0.26 -1.3 1,550,336 + BPHYT_RS26660 0.28 -0.7 1,550,480 - BPHYT_RS26660 0.48 -1.3 1,550,846 - -0.4 1,551,085 + BPHYT_RS26665 0.22 -0.8 1,551,200 - BPHYT_RS26665 0.38 -0.4 1,551,230 + BPHYT_RS26665 0.42 +0.1 1,551,257 - BPHYT_RS26665 0.46 +0.5 1,551,479 + BPHYT_RS26665 0.77 -0.4 1,551,489 + BPHYT_RS26665 0.78 -0.3 1,551,567 + BPHYT_RS26665 0.89 -1.1 1,551,568 - BPHYT_RS26665 0.89 -0.2 1,551,569 + BPHYT_RS26665 0.89 -0.8 1,551,570 - BPHYT_RS26665 0.89 +0.8
Or see this region's nucleotide sequence