Experiment: L-Phenylalanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21725 and BPHYT_RS21730 are separated by 345 nucleotides BPHYT_RS21730 and BPHYT_RS21735 are separated by 42 nucleotides BPHYT_RS21735 and BPHYT_RS21740 are separated by 118 nucleotides
BPHYT_RS21725: BPHYT_RS21725 - taurine ABC transporter substrate-binding protein, at 429,989 to 431,023
_RS21725
BPHYT_RS21730: BPHYT_RS21730 - 2-aminoadipate aminotransferase, at 431,369 to 432,895
_RS21730
BPHYT_RS21735: BPHYT_RS21735 - IclR family transcriptional regulator, at 432,938 to 433,690
_RS21735
BPHYT_RS21740: BPHYT_RS21740 - IclR family transcriptional regulator, at 433,809 to 434,645
_RS21740
Position (kb) 431
432
433 Strain fitness (log2 ratio) -1
0
1 at 430.908 kb on + strand, within BPHYT_RS21725 at 431.050 kb on + strand at 431.062 kb on + strand at 431.214 kb on - strand at 431.223 kb on + strand at 431.223 kb on + strand at 431.223 kb on + strand at 431.594 kb on + strand, within BPHYT_RS21730 at 431.860 kb on + strand, within BPHYT_RS21730 at 431.861 kb on - strand, within BPHYT_RS21730 at 432.024 kb on + strand, within BPHYT_RS21730 at 432.024 kb on + strand, within BPHYT_RS21730 at 432.026 kb on + strand, within BPHYT_RS21730 at 432.103 kb on + strand, within BPHYT_RS21730 at 432.206 kb on + strand, within BPHYT_RS21730 at 432.206 kb on + strand, within BPHYT_RS21730 at 432.207 kb on - strand, within BPHYT_RS21730 at 432.393 kb on - strand, within BPHYT_RS21730 at 432.440 kb on + strand, within BPHYT_RS21730 at 432.516 kb on - strand, within BPHYT_RS21730 at 432.591 kb on - strand, within BPHYT_RS21730 at 433.048 kb on + strand, within BPHYT_RS21735 at 433.126 kb on + strand, within BPHYT_RS21735 at 433.350 kb on + strand, within BPHYT_RS21735 at 433.350 kb on + strand, within BPHYT_RS21735 at 433.351 kb on - strand, within BPHYT_RS21735 at 433.725 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (C) remove 430,908 + BPHYT_RS21725 0.89 +1.0 431,050 + -0.2 431,062 + +0.2 431,214 - -0.9 431,223 + +0.8 431,223 + +0.2 431,223 + -0.1 431,594 + BPHYT_RS21730 0.15 -0.2 431,860 + BPHYT_RS21730 0.32 +0.4 431,861 - BPHYT_RS21730 0.32 -0.2 432,024 + BPHYT_RS21730 0.43 +0.8 432,024 + BPHYT_RS21730 0.43 -0.3 432,026 + BPHYT_RS21730 0.43 +0.3 432,103 + BPHYT_RS21730 0.48 +0.2 432,206 + BPHYT_RS21730 0.55 -0.0 432,206 + BPHYT_RS21730 0.55 +0.5 432,207 - BPHYT_RS21730 0.55 -0.2 432,393 - BPHYT_RS21730 0.67 +0.3 432,440 + BPHYT_RS21730 0.70 +0.0 432,516 - BPHYT_RS21730 0.75 +0.3 432,591 - BPHYT_RS21730 0.80 +0.3 433,048 + BPHYT_RS21735 0.15 -0.5 433,126 + BPHYT_RS21735 0.25 +0.0 433,350 + BPHYT_RS21735 0.55 -0.2 433,350 + BPHYT_RS21735 0.55 -0.2 433,351 - BPHYT_RS21735 0.55 -0.0 433,725 + -0.3
Or see this region's nucleotide sequence