Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17870 and AO356_17875 overlap by 14 nucleotides AO356_17875 and AO356_17880 overlap by 4 nucleotides AO356_17880 and AO356_17885 are separated by 345 nucleotides
AO356_17870: AO356_17870 - hypothetical protein, at 4,032,463 to 4,034,004
_17870
AO356_17875: AO356_17875 - hypothetical protein, at 4,033,991 to 4,034,965
_17875
AO356_17880: AO356_17880 - hypothetical protein, at 4,034,962 to 4,035,687
_17880
AO356_17885: AO356_17885 - exonuclease I, at 4,036,033 to 4,037,469
_17885
Position (kb)
4034
4035
4036 Strain fitness (log2 ratio)
-1
0
1 at 4034.031 kb on + strand at 4034.031 kb on + strand at 4034.031 kb on + strand at 4034.032 kb on - strand at 4034.032 kb on - strand at 4034.032 kb on - strand at 4034.032 kb on - strand at 4034.032 kb on - strand at 4034.070 kb on + strand at 4034.070 kb on + strand at 4034.070 kb on + strand at 4034.071 kb on - strand at 4034.071 kb on - strand at 4034.071 kb on - strand at 4034.107 kb on - strand, within AO356_17875 at 4034.107 kb on - strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.138 kb on + strand, within AO356_17875 at 4034.139 kb on - strand, within AO356_17875 at 4034.139 kb on - strand, within AO356_17875 at 4034.139 kb on - strand, within AO356_17875 at 4034.139 kb on - strand, within AO356_17875 at 4034.357 kb on + strand, within AO356_17875 at 4034.357 kb on + strand, within AO356_17875 at 4034.357 kb on + strand, within AO356_17875 at 4034.357 kb on + strand, within AO356_17875 at 4034.358 kb on - strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.457 kb on + strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.458 kb on - strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.532 kb on + strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.533 kb on - strand, within AO356_17875 at 4034.577 kb on + strand, within AO356_17875 at 4034.578 kb on - strand, within AO356_17875 at 4034.578 kb on - strand, within AO356_17875 at 4034.578 kb on - strand, within AO356_17875 at 4034.578 kb on - strand, within AO356_17875 at 4034.578 kb on - strand, within AO356_17875 at 4034.598 kb on + strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.599 kb on - strand, within AO356_17875 at 4034.702 kb on - strand, within AO356_17875 at 4034.742 kb on + strand, within AO356_17875 at 4034.743 kb on - strand, within AO356_17875 at 4034.802 kb on + strand, within AO356_17875 at 4034.803 kb on - strand, within AO356_17875 at 4035.152 kb on - strand, within AO356_17880 at 4035.282 kb on - strand, within AO356_17880 at 4035.415 kb on + strand, within AO356_17880 at 4035.416 kb on - strand, within AO356_17880 at 4035.434 kb on + strand, within AO356_17880 at 4035.434 kb on + strand, within AO356_17880 at 4035.434 kb on + strand, within AO356_17880 at 4035.434 kb on + strand, within AO356_17880 at 4035.434 kb on + strand, within AO356_17880 at 4035.435 kb on - strand, within AO356_17880 at 4035.435 kb on - strand, within AO356_17880 at 4035.435 kb on - strand, within AO356_17880 at 4035.435 kb on - strand, within AO356_17880 at 4035.535 kb on + strand, within AO356_17880 at 4035.536 kb on - strand, within AO356_17880 at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.723 kb on + strand at 4035.724 kb on - strand at 4035.724 kb on - strand at 4035.738 kb on + strand at 4035.738 kb on + strand at 4035.738 kb on + strand at 4035.753 kb on - strand at 4035.854 kb on - strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.920 kb on + strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.921 kb on - strand at 4035.934 kb on + strand at 4035.934 kb on + strand at 4035.935 kb on - strand at 4035.935 kb on - strand at 4035.935 kb on - strand at 4035.935 kb on - strand at 4035.935 kb on - strand at 4036.000 kb on - strand at 4036.159 kb on + strand at 4036.159 kb on + strand at 4036.159 kb on + strand at 4036.160 kb on - strand at 4036.300 kb on - strand, within AO356_17885 at 4036.316 kb on - strand, within AO356_17885 at 4036.316 kb on - strand, within AO356_17885 at 4036.568 kb on + strand, within AO356_17885 at 4036.568 kb on + strand, within AO356_17885 at 4036.569 kb on - strand, within AO356_17885 at 4036.569 kb on - strand, within AO356_17885 at 4036.622 kb on - strand, within AO356_17885 at 4036.622 kb on - strand, within AO356_17885 at 4036.622 kb on - strand, within AO356_17885
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 4,034,031 + -0.3 4,034,031 + -0.6 4,034,031 + -1.0 4,034,032 - -1.0 4,034,032 - -0.1 4,034,032 - +0.5 4,034,032 - +0.1 4,034,032 - +1.3 4,034,070 + -0.6 4,034,070 + +0.4 4,034,070 + -0.2 4,034,071 - -0.2 4,034,071 - +0.8 4,034,071 - -0.1 4,034,107 - AO356_17875 0.12 -1.0 4,034,107 - AO356_17875 0.12 +0.4 4,034,138 + AO356_17875 0.15 -0.9 4,034,138 + AO356_17875 0.15 -0.3 4,034,138 + AO356_17875 0.15 -0.1 4,034,138 + AO356_17875 0.15 +0.1 4,034,138 + AO356_17875 0.15 -0.1 4,034,138 + AO356_17875 0.15 +0.4 4,034,138 + AO356_17875 0.15 +1.3 4,034,138 + AO356_17875 0.15 -0.6 4,034,139 - AO356_17875 0.15 -0.3 4,034,139 - AO356_17875 0.15 +0.1 4,034,139 - AO356_17875 0.15 -1.1 4,034,139 - AO356_17875 0.15 +0.6 4,034,357 + AO356_17875 0.38 +0.1 4,034,357 + AO356_17875 0.38 +0.7 4,034,357 + AO356_17875 0.38 +0.0 4,034,357 + AO356_17875 0.38 -1.2 4,034,358 - AO356_17875 0.38 -0.3 4,034,457 + AO356_17875 0.48 -1.3 4,034,457 + AO356_17875 0.48 +0.6 4,034,457 + AO356_17875 0.48 -1.6 4,034,457 + AO356_17875 0.48 -0.2 4,034,457 + AO356_17875 0.48 -1.2 4,034,457 + AO356_17875 0.48 -0.6 4,034,457 + AO356_17875 0.48 -0.9 4,034,457 + AO356_17875 0.48 +0.6 4,034,457 + AO356_17875 0.48 -0.3 4,034,458 - AO356_17875 0.48 +0.0 4,034,458 - AO356_17875 0.48 -0.3 4,034,458 - AO356_17875 0.48 +0.1 4,034,458 - AO356_17875 0.48 +0.3 4,034,458 - AO356_17875 0.48 -1.1 4,034,458 - AO356_17875 0.48 -1.1 4,034,458 - AO356_17875 0.48 +0.2 4,034,458 - AO356_17875 0.48 +0.7 4,034,458 - AO356_17875 0.48 +0.5 4,034,458 - AO356_17875 0.48 +0.4 4,034,458 - AO356_17875 0.48 +0.1 4,034,458 - AO356_17875 0.48 +0.6 4,034,458 - AO356_17875 0.48 +0.2 4,034,532 + AO356_17875 0.55 -0.6 4,034,532 + AO356_17875 0.55 +0.1 4,034,532 + AO356_17875 0.55 +1.2 4,034,532 + AO356_17875 0.55 -0.0 4,034,532 + AO356_17875 0.55 +0.7 4,034,532 + AO356_17875 0.55 +0.1 4,034,532 + AO356_17875 0.55 +0.3 4,034,532 + AO356_17875 0.55 -0.2 4,034,532 + AO356_17875 0.55 +0.3 4,034,532 + AO356_17875 0.55 +0.2 4,034,532 + AO356_17875 0.55 -0.5 4,034,532 + AO356_17875 0.55 -0.6 4,034,532 + AO356_17875 0.55 -0.0 4,034,533 - AO356_17875 0.56 -0.6 4,034,533 - AO356_17875 0.56 +0.1 4,034,533 - AO356_17875 0.56 +1.4 4,034,533 - AO356_17875 0.56 +0.2 4,034,533 - AO356_17875 0.56 +0.1 4,034,533 - AO356_17875 0.56 +0.5 4,034,533 - AO356_17875 0.56 -0.6 4,034,533 - AO356_17875 0.56 -1.5 4,034,533 - AO356_17875 0.56 +0.6 4,034,533 - AO356_17875 0.56 -0.0 4,034,533 - AO356_17875 0.56 +0.9 4,034,533 - AO356_17875 0.56 -1.0 4,034,577 + AO356_17875 0.60 -0.0 4,034,578 - AO356_17875 0.60 -0.4 4,034,578 - AO356_17875 0.60 +1.0 4,034,578 - AO356_17875 0.60 -0.1 4,034,578 - AO356_17875 0.60 -0.2 4,034,578 - AO356_17875 0.60 -0.6 4,034,598 + AO356_17875 0.62 +0.1 4,034,599 - AO356_17875 0.62 +0.1 4,034,599 - AO356_17875 0.62 +0.3 4,034,599 - AO356_17875 0.62 +0.9 4,034,599 - AO356_17875 0.62 -0.7 4,034,599 - AO356_17875 0.62 +0.6 4,034,599 - AO356_17875 0.62 +0.5 4,034,599 - AO356_17875 0.62 -0.7 4,034,599 - AO356_17875 0.62 +0.1 4,034,702 - AO356_17875 0.73 +1.5 4,034,742 + AO356_17875 0.77 +0.3 4,034,743 - AO356_17875 0.77 +0.9 4,034,802 + AO356_17875 0.83 +0.7 4,034,803 - AO356_17875 0.83 -1.2 4,035,152 - AO356_17880 0.26 +1.0 4,035,282 - AO356_17880 0.44 +0.4 4,035,415 + AO356_17880 0.62 +0.2 4,035,416 - AO356_17880 0.63 +0.3 4,035,434 + AO356_17880 0.65 -0.4 4,035,434 + AO356_17880 0.65 -0.1 4,035,434 + AO356_17880 0.65 -0.4 4,035,434 + AO356_17880 0.65 +0.3 4,035,434 + AO356_17880 0.65 +0.9 4,035,435 - AO356_17880 0.65 +0.5 4,035,435 - AO356_17880 0.65 +0.9 4,035,435 - AO356_17880 0.65 +0.4 4,035,435 - AO356_17880 0.65 -0.7 4,035,535 + AO356_17880 0.79 +0.3 4,035,536 - AO356_17880 0.79 -1.4 4,035,723 + +0.1 4,035,723 + -0.1 4,035,723 + +0.6 4,035,723 + +0.1 4,035,723 + +0.7 4,035,723 + +0.6 4,035,723 + -0.4 4,035,723 + +0.6 4,035,724 - -0.1 4,035,724 - +0.4 4,035,738 + +0.7 4,035,738 + +0.8 4,035,738 + -0.6 4,035,753 - -0.5 4,035,854 - -0.3 4,035,920 + +0.8 4,035,920 + +0.4 4,035,920 + -0.8 4,035,920 + +1.4 4,035,920 + -0.7 4,035,920 + +0.8 4,035,920 + +0.2 4,035,921 - +0.0 4,035,921 - -1.4 4,035,921 - -0.3 4,035,921 - -0.6 4,035,921 - +1.6 4,035,921 - -0.0 4,035,921 - +0.2 4,035,921 - +1.1 4,035,921 - +1.4 4,035,921 - +0.4 4,035,934 + -0.7 4,035,934 + +0.5 4,035,935 - -0.5 4,035,935 - +0.8 4,035,935 - +0.2 4,035,935 - +0.7 4,035,935 - -0.3 4,036,000 - +0.3 4,036,159 + +0.3 4,036,159 + -0.6 4,036,159 + -0.1 4,036,160 - +0.2 4,036,300 - AO356_17885 0.19 -0.3 4,036,316 - AO356_17885 0.20 -0.9 4,036,316 - AO356_17885 0.20 -0.6 4,036,568 + AO356_17885 0.37 -1.3 4,036,568 + AO356_17885 0.37 -0.2 4,036,569 - AO356_17885 0.37 +0.1 4,036,569 - AO356_17885 0.37 +0.0 4,036,622 - AO356_17885 0.41 -0.6 4,036,622 - AO356_17885 0.41 -0.2 4,036,622 - AO356_17885 0.41 +1.3
Or see this region's nucleotide sequence