Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01125 and AO356_01130 overlap by 4 nucleotides AO356_01130 and AO356_01135 are separated by 292 nucleotides
AO356_01125: AO356_01125 - ABC transporter permease, at 256,158 to 258,629
_01125
AO356_01130: AO356_01130 - ABC transporter ATP-binding protein, at 258,626 to 259,294
_01130
AO356_01135: AO356_01135 - sulfatase, at 259,587 to 261,284
_01135
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1 at 257.651 kb on - strand, within AO356_01125 at 257.886 kb on + strand, within AO356_01125 at 258.146 kb on + strand, within AO356_01125 at 258.481 kb on + strand at 258.481 kb on + strand at 258.482 kb on - strand at 259.264 kb on - strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.271 kb on - strand at 259.271 kb on - strand at 259.272 kb on + strand at 259.380 kb on + strand at 259.380 kb on + strand at 259.381 kb on - strand at 259.451 kb on + strand at 259.451 kb on + strand at 259.451 kb on + strand at 259.515 kb on + strand at 259.516 kb on - strand at 259.516 kb on - strand at 259.581 kb on - strand at 259.582 kb on + strand at 259.583 kb on - strand at 259.583 kb on - strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.804 kb on + strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.934 kb on + strand, within AO356_01135 at 259.934 kb on + strand, within AO356_01135 at 259.984 kb on + strand, within AO356_01135 at 259.984 kb on + strand, within AO356_01135 at 259.985 kb on - strand, within AO356_01135 at 259.985 kb on - strand, within AO356_01135 at 260.069 kb on - strand, within AO356_01135 at 260.173 kb on + strand, within AO356_01135 at 260.173 kb on + strand, within AO356_01135 at 260.174 kb on - strand, within AO356_01135 at 260.174 kb on - strand, within AO356_01135 at 260.195 kb on - strand, within AO356_01135
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 257,651 - AO356_01125 0.60 -0.1 257,886 + AO356_01125 0.70 +0.4 258,146 + AO356_01125 0.80 -0.3 258,481 + +0.1 258,481 + +0.6 258,482 - -2.3 259,264 - -0.7 259,270 + +0.1 259,270 + +0.7 259,270 + +1.1 259,270 + +0.4 259,270 + -0.8 259,271 - +0.8 259,271 - +0.2 259,272 + -1.6 259,380 + +0.4 259,380 + -0.0 259,381 - -0.2 259,451 + +0.3 259,451 + -0.0 259,451 + -2.1 259,515 + +0.6 259,516 - -0.7 259,516 - +0.0 259,581 - -1.4 259,582 + -0.3 259,583 - -1.2 259,583 - -0.9 259,649 + -0.7 259,649 + -0.7 259,649 + -2.2 259,649 + -0.1 259,649 + +0.5 259,804 + AO356_01135 0.13 +1.6 259,805 - AO356_01135 0.13 +0.9 259,805 - AO356_01135 0.13 +1.2 259,805 - AO356_01135 0.13 +0.1 259,934 + AO356_01135 0.20 +0.5 259,934 + AO356_01135 0.20 +0.4 259,984 + AO356_01135 0.23 -0.4 259,984 + AO356_01135 0.23 -0.7 259,985 - AO356_01135 0.23 +0.3 259,985 - AO356_01135 0.23 +0.7 260,069 - AO356_01135 0.28 -0.2 260,173 + AO356_01135 0.35 -0.2 260,173 + AO356_01135 0.35 -0.4 260,174 - AO356_01135 0.35 +0.3 260,174 - AO356_01135 0.35 -0.8 260,195 - AO356_01135 0.36 +1.0
Or see this region's nucleotide sequence