Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4585 and Psyr_4586 are separated by 148 nucleotides Psyr_4586 and Psyr_4587 overlap by 13 nucleotides Psyr_4587 and Psyr_4588 overlap by 11 nucleotides Psyr_4588 and Psyr_4589 overlap by 4 nucleotides Psyr_4589 and Psyr_4590 overlap by 4 nucleotides
Psyr_4585: Psyr_4585 - hypothetical protein, at 5,445,804 to 5,447,126
_4585
Psyr_4586: Psyr_4586 - tail protein, putative, at 5,447,275 to 5,447,874
_4586
Psyr_4587: Psyr_4587 - Baseplate J-like protein, at 5,447,862 to 5,448,902
_4587
Psyr_4588: Psyr_4588 - Phage GP46, at 5,448,892 to 5,449,290
_4588
Psyr_4589: Psyr_4589 - Phage baseplate assembly protein V, at 5,449,287 to 5,449,799
_4589
Psyr_4590: Psyr_4590 - Bacteriophage Mu P, at 5,449,796 to 5,450,923
_4590
Position (kb) 5447
5448
5449 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.865 kb on + strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.866 kb on - strand, within Psyr_4585 at 5446.889 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.907 kb on + strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.908 kb on - strand, within Psyr_4585 at 5446.911 kb on + strand, within Psyr_4585 at 5446.911 kb on + strand, within Psyr_4585 at 5446.917 kb on + strand, within Psyr_4585 at 5446.917 kb on + strand, within Psyr_4585 at 5446.918 kb on - strand, within Psyr_4585 at 5447.035 kb on + strand at 5447.036 kb on - strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.058 kb on + strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.059 kb on - strand at 5447.157 kb on - strand at 5447.175 kb on - strand at 5447.175 kb on - strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.211 kb on + strand at 5447.212 kb on - strand at 5447.236 kb on - strand at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.552 kb on + strand, within Psyr_4586 at 5447.553 kb on - strand, within Psyr_4586 at 5447.846 kb on + strand at 5447.847 kb on - strand at 5447.863 kb on + strand at 5447.864 kb on - strand at 5447.864 kb on - strand at 5448.098 kb on - strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.130 kb on + strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.131 kb on - strand, within Psyr_4587 at 5448.166 kb on + strand, within Psyr_4587 at 5448.166 kb on + strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.167 kb on - strand, within Psyr_4587 at 5448.295 kb on - strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.316 kb on + strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.317 kb on - strand, within Psyr_4587 at 5448.574 kb on + strand, within Psyr_4587 at 5448.772 kb on + strand, within Psyr_4587 at 5448.884 kb on + strand at 5448.884 kb on + strand at 5448.884 kb on + strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.885 kb on - strand at 5448.902 kb on + strand at 5448.902 kb on + strand at 5448.903 kb on - strand at 5448.903 kb on - strand at 5449.005 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.067 kb on + strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.068 kb on - strand, within Psyr_4588 at 5449.367 kb on + strand, within Psyr_4589 at 5449.368 kb on - strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.528 kb on + strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.529 kb on - strand, within Psyr_4589 at 5449.632 kb on - strand, within Psyr_4589 at 5449.836 kb on + strand at 5449.836 kb on + strand at 5449.837 kb on - strand at 5449.837 kb on - strand at 5449.837 kb on - strand at 5449.837 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,446,865 + Psyr_4585 0.80 +0.2 5,446,865 + Psyr_4585 0.80 +1.1 5,446,865 + Psyr_4585 0.80 -0.6 5,446,865 + Psyr_4585 0.80 -0.7 5,446,865 + Psyr_4585 0.80 -0.5 5,446,866 - Psyr_4585 0.80 -1.0 5,446,866 - Psyr_4585 0.80 -1.0 5,446,866 - Psyr_4585 0.80 +1.2 5,446,866 - Psyr_4585 0.80 +1.9 5,446,889 + Psyr_4585 0.82 +1.6 5,446,907 + Psyr_4585 0.83 +0.9 5,446,907 + Psyr_4585 0.83 -1.7 5,446,907 + Psyr_4585 0.83 -0.9 5,446,907 + Psyr_4585 0.83 +0.7 5,446,908 - Psyr_4585 0.83 +0.6 5,446,908 - Psyr_4585 0.83 -0.3 5,446,908 - Psyr_4585 0.83 -0.7 5,446,908 - Psyr_4585 0.83 +0.2 5,446,908 - Psyr_4585 0.83 -0.3 5,446,908 - Psyr_4585 0.83 -1.3 5,446,908 - Psyr_4585 0.83 +0.4 5,446,908 - Psyr_4585 0.83 -0.6 5,446,911 + Psyr_4585 0.84 -0.8 5,446,911 + Psyr_4585 0.84 +0.9 5,446,917 + Psyr_4585 0.84 +1.3 5,446,917 + Psyr_4585 0.84 -1.0 5,446,918 - Psyr_4585 0.84 -0.9 5,447,035 + -0.9 5,447,036 - -0.7 5,447,058 + -0.1 5,447,058 + -1.3 5,447,058 + +0.1 5,447,058 + -0.8 5,447,058 + +0.5 5,447,059 - -0.1 5,447,059 - -0.3 5,447,059 - +0.3 5,447,059 - +0.5 5,447,059 - -0.3 5,447,157 - +0.6 5,447,175 - -0.5 5,447,175 - -0.8 5,447,211 + +0.2 5,447,211 + +0.9 5,447,211 + +0.9 5,447,211 + -0.2 5,447,212 - +0.1 5,447,236 - -1.8 5,447,552 + Psyr_4586 0.46 -0.4 5,447,552 + Psyr_4586 0.46 +0.5 5,447,552 + Psyr_4586 0.46 -0.5 5,447,552 + Psyr_4586 0.46 +0.3 5,447,552 + Psyr_4586 0.46 +1.6 5,447,553 - Psyr_4586 0.46 -0.3 5,447,846 + -1.2 5,447,847 - -1.0 5,447,863 + +1.5 5,447,864 - +0.2 5,447,864 - -2.2 5,448,098 - Psyr_4587 0.23 +0.1 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 -1.6 5,448,130 + Psyr_4587 0.26 +0.3 5,448,130 + Psyr_4587 0.26 -2.1 5,448,130 + Psyr_4587 0.26 -0.7 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 +0.9 5,448,130 + Psyr_4587 0.26 -0.5 5,448,130 + Psyr_4587 0.26 +0.1 5,448,130 + Psyr_4587 0.26 -0.6 5,448,130 + Psyr_4587 0.26 -0.2 5,448,130 + Psyr_4587 0.26 -0.8 5,448,130 + Psyr_4587 0.26 -0.9 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 +0.4 5,448,130 + Psyr_4587 0.26 +1.0 5,448,130 + Psyr_4587 0.26 -0.1 5,448,130 + Psyr_4587 0.26 -0.3 5,448,130 + Psyr_4587 0.26 -1.6 5,448,130 + Psyr_4587 0.26 +1.3 5,448,130 + Psyr_4587 0.26 +0.1 5,448,130 + Psyr_4587 0.26 +0.7 5,448,130 + Psyr_4587 0.26 -0.5 5,448,130 + Psyr_4587 0.26 -0.8 5,448,130 + Psyr_4587 0.26 -0.2 5,448,131 - Psyr_4587 0.26 -0.8 5,448,131 - Psyr_4587 0.26 -1.7 5,448,131 - Psyr_4587 0.26 +1.0 5,448,131 - Psyr_4587 0.26 -0.5 5,448,131 - Psyr_4587 0.26 -0.7 5,448,131 - Psyr_4587 0.26 -1.5 5,448,131 - Psyr_4587 0.26 +0.3 5,448,131 - Psyr_4587 0.26 +1.2 5,448,131 - Psyr_4587 0.26 +1.1 5,448,131 - Psyr_4587 0.26 -0.6 5,448,131 - Psyr_4587 0.26 -0.8 5,448,131 - Psyr_4587 0.26 -1.2 5,448,131 - Psyr_4587 0.26 +0.4 5,448,131 - Psyr_4587 0.26 +0.3 5,448,131 - Psyr_4587 0.26 +1.6 5,448,131 - Psyr_4587 0.26 +0.1 5,448,131 - Psyr_4587 0.26 -0.9 5,448,131 - Psyr_4587 0.26 +0.2 5,448,166 + Psyr_4587 0.29 +0.1 5,448,166 + Psyr_4587 0.29 +1.1 5,448,167 - Psyr_4587 0.29 +1.3 5,448,167 - Psyr_4587 0.29 +2.0 5,448,167 - Psyr_4587 0.29 +0.9 5,448,167 - Psyr_4587 0.29 -0.5 5,448,295 - Psyr_4587 0.42 -0.6 5,448,316 + Psyr_4587 0.44 +0.8 5,448,316 + Psyr_4587 0.44 +0.3 5,448,316 + Psyr_4587 0.44 +0.9 5,448,316 + Psyr_4587 0.44 -2.4 5,448,316 + Psyr_4587 0.44 -0.7 5,448,316 + Psyr_4587 0.44 -2.0 5,448,316 + Psyr_4587 0.44 +0.2 5,448,316 + Psyr_4587 0.44 +2.2 5,448,317 - Psyr_4587 0.44 -0.4 5,448,317 - Psyr_4587 0.44 +0.6 5,448,317 - Psyr_4587 0.44 -0.3 5,448,317 - Psyr_4587 0.44 +1.9 5,448,574 + Psyr_4587 0.68 +0.7 5,448,772 + Psyr_4587 0.87 -0.3 5,448,884 + +0.1 5,448,884 + +0.0 5,448,884 + -0.6 5,448,885 - -0.1 5,448,885 - +0.4 5,448,885 - -0.5 5,448,885 - +2.0 5,448,885 - +0.6 5,448,885 - -0.1 5,448,885 - +0.1 5,448,885 - +0.7 5,448,885 - -0.2 5,448,885 - +1.4 5,448,885 - -1.3 5,448,885 - -0.1 5,448,885 - -1.3 5,448,885 - +1.5 5,448,885 - -0.5 5,448,902 + +1.1 5,448,902 + +0.7 5,448,903 - -0.7 5,448,903 - +0.4 5,449,005 + Psyr_4588 0.28 -0.4 5,449,067 + Psyr_4588 0.44 +1.0 5,449,067 + Psyr_4588 0.44 +0.1 5,449,067 + Psyr_4588 0.44 +0.1 5,449,067 + Psyr_4588 0.44 -1.0 5,449,067 + Psyr_4588 0.44 -0.1 5,449,068 - Psyr_4588 0.44 -1.1 5,449,068 - Psyr_4588 0.44 -0.4 5,449,068 - Psyr_4588 0.44 -0.3 5,449,367 + Psyr_4589 0.16 -0.8 5,449,368 - Psyr_4589 0.16 +0.0 5,449,528 + Psyr_4589 0.47 -1.1 5,449,528 + Psyr_4589 0.47 +0.9 5,449,528 + Psyr_4589 0.47 -0.5 5,449,528 + Psyr_4589 0.47 +0.6 5,449,529 - Psyr_4589 0.47 +0.9 5,449,529 - Psyr_4589 0.47 -1.4 5,449,529 - Psyr_4589 0.47 +2.1 5,449,529 - Psyr_4589 0.47 -0.4 5,449,529 - Psyr_4589 0.47 +0.8 5,449,529 - Psyr_4589 0.47 +0.3 5,449,632 - Psyr_4589 0.67 -1.3 5,449,836 + +0.9 5,449,836 + -0.8 5,449,837 - -0.4 5,449,837 - +0.0 5,449,837 - +0.1 5,449,837 - -0.4
Or see this region's nucleotide sequence