Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4292 and Psyr_4293 overlap by 4 nucleotides Psyr_4293 and Psyr_4294 are separated by 139 nucleotides Psyr_4294 and Psyr_4295 are separated by 120 nucleotides
Psyr_4292: Psyr_4292 - HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1, at 5,119,039 to 5,119,629
_4292
Psyr_4293: Psyr_4293 - Acyl-CoA thioesterase, at 5,119,626 to 5,120,495
_4293
Psyr_4294: Psyr_4294 - Histone deacetylase family protein, at 5,120,635 to 5,121,204
_4294
Psyr_4295: Psyr_4295 - Histone deacetylase superfamily, at 5,121,325 to 5,122,242
_4295
Position (kb) 5119
5120
5121 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.769 kb on + strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.770 kb on - strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.771 kb on + strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.772 kb on - strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.773 kb on + strand at 5118.774 kb on - strand at 5118.774 kb on - strand at 5118.774 kb on - strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.783 kb on + strand at 5118.784 kb on - strand at 5118.784 kb on - strand at 5118.834 kb on - strand at 5118.834 kb on - strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.946 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.948 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5118.960 kb on + strand at 5119.026 kb on + strand at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.172 kb on + strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.173 kb on - strand, within Psyr_4292 at 5119.231 kb on + strand, within Psyr_4292 at 5119.231 kb on + strand, within Psyr_4292 at 5119.276 kb on + strand, within Psyr_4292 at 5119.276 kb on + strand, within Psyr_4292 at 5119.277 kb on - strand, within Psyr_4292 at 5119.277 kb on - strand, within Psyr_4292 at 5119.277 kb on - strand, within Psyr_4292 at 5119.327 kb on - strand, within Psyr_4292 at 5119.327 kb on - strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.328 kb on + strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.329 kb on - strand, within Psyr_4292 at 5119.357 kb on + strand, within Psyr_4292 at 5119.357 kb on + strand, within Psyr_4292 at 5119.358 kb on - strand, within Psyr_4292 at 5119.584 kb on + strand at 5119.585 kb on - strand at 5119.612 kb on + strand at 5119.613 kb on - strand at 5119.613 kb on - strand at 5119.613 kb on - strand at 5119.614 kb on + strand at 5119.614 kb on + strand at 5119.615 kb on - strand at 5119.615 kb on - strand at 5119.615 kb on - strand at 5119.615 kb on - strand at 5119.640 kb on + strand at 5119.641 kb on - strand at 5119.641 kb on - strand at 5119.703 kb on + strand at 5119.703 kb on + strand at 5119.703 kb on + strand at 5119.703 kb on + strand at 5119.757 kb on - strand, within Psyr_4293 at 5119.895 kb on - strand, within Psyr_4293 at 5119.895 kb on - strand, within Psyr_4293 at 5119.906 kb on + strand, within Psyr_4293 at 5119.906 kb on + strand, within Psyr_4293 at 5119.906 kb on + strand, within Psyr_4293 at 5119.907 kb on - strand, within Psyr_4293 at 5119.907 kb on - strand, within Psyr_4293 at 5119.907 kb on - strand, within Psyr_4293 at 5119.907 kb on - strand, within Psyr_4293 at 5119.907 kb on - strand, within Psyr_4293 at 5119.960 kb on + strand, within Psyr_4293 at 5119.960 kb on + strand, within Psyr_4293 at 5119.960 kb on + strand, within Psyr_4293 at 5119.961 kb on - strand, within Psyr_4293 at 5119.961 kb on - strand, within Psyr_4293 at 5119.961 kb on - strand, within Psyr_4293 at 5119.961 kb on - strand, within Psyr_4293 at 5119.961 kb on - strand, within Psyr_4293 at 5120.269 kb on + strand, within Psyr_4293 at 5120.420 kb on + strand at 5120.510 kb on + strand at 5120.510 kb on + strand at 5120.511 kb on - strand at 5120.511 kb on - strand at 5120.511 kb on - strand at 5120.511 kb on - strand at 5120.529 kb on + strand at 5120.529 kb on + strand at 5120.530 kb on - strand at 5120.593 kb on + strand at 5120.594 kb on - strand at 5120.594 kb on - strand at 5120.601 kb on + strand at 5120.601 kb on + strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.602 kb on - strand at 5120.615 kb on + strand at 5120.616 kb on - strand at 5120.616 kb on - strand at 5120.974 kb on + strand, within Psyr_4294 at 5120.974 kb on + strand, within Psyr_4294 at 5120.975 kb on - strand, within Psyr_4294 at 5120.975 kb on - strand, within Psyr_4294 at 5120.975 kb on - strand, within Psyr_4294 at 5121.285 kb on + strand at 5121.286 kb on - strand at 5121.340 kb on - strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.343 kb on + strand at 5121.344 kb on - strand at 5121.344 kb on - strand at 5121.344 kb on - strand at 5121.344 kb on - strand at 5121.344 kb on - strand at 5121.344 kb on - strand at 5121.355 kb on + strand at 5121.355 kb on + strand at 5121.355 kb on + strand at 5121.356 kb on - strand at 5121.418 kb on + strand, within Psyr_4295 at 5121.418 kb on + strand, within Psyr_4295 at 5121.418 kb on + strand, within Psyr_4295 at 5121.419 kb on - strand, within Psyr_4295 at 5121.419 kb on - strand, within Psyr_4295 at 5121.455 kb on + strand, within Psyr_4295 at 5121.455 kb on + strand, within Psyr_4295 at 5121.456 kb on - strand, within Psyr_4295 at 5121.456 kb on - strand, within Psyr_4295
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 5,118,769 + +0.4 5,118,769 + +1.1 5,118,769 + +0.3 5,118,769 + -0.3 5,118,769 + -2.3 5,118,769 + +0.9 5,118,769 + +0.4 5,118,769 + +0.9 5,118,769 + -0.3 5,118,769 + -1.7 5,118,769 + -0.7 5,118,769 + +0.5 5,118,769 + +0.3 5,118,769 + -0.3 5,118,770 - +0.1 5,118,770 - +0.9 5,118,770 - +0.5 5,118,770 - +0.6 5,118,770 - -0.9 5,118,770 - -0.4 5,118,771 + -0.1 5,118,771 + +0.6 5,118,771 + -1.4 5,118,771 + +1.5 5,118,771 + -0.9 5,118,771 + -0.7 5,118,772 - +0.3 5,118,772 - +1.2 5,118,772 - +0.2 5,118,772 - +0.5 5,118,772 - -0.1 5,118,772 - +1.2 5,118,773 + -0.2 5,118,773 + +0.9 5,118,773 + -0.6 5,118,773 + +0.6 5,118,773 + +1.1 5,118,774 - +1.4 5,118,774 - +0.0 5,118,774 - +0.6 5,118,783 + +0.9 5,118,783 + +0.2 5,118,783 + -0.9 5,118,783 + -0.6 5,118,784 - -0.1 5,118,784 - +1.2 5,118,834 - +1.9 5,118,834 - -2.1 5,118,946 + -1.7 5,118,946 + -0.7 5,118,946 + -0.7 5,118,946 + +0.3 5,118,946 + +1.9 5,118,948 + +1.5 5,118,948 + -1.7 5,118,948 + +0.0 5,118,948 + +0.2 5,118,960 + -0.3 5,118,960 + -0.4 5,118,960 + +0.1 5,118,960 + +0.6 5,119,026 + -2.4 5,119,172 + Psyr_4292 0.23 -0.6 5,119,172 + Psyr_4292 0.23 -0.1 5,119,172 + Psyr_4292 0.23 -0.4 5,119,172 + Psyr_4292 0.23 -0.5 5,119,172 + Psyr_4292 0.23 -0.4 5,119,172 + Psyr_4292 0.23 +0.2 5,119,172 + Psyr_4292 0.23 -1.3 5,119,173 - Psyr_4292 0.23 -0.2 5,119,173 - Psyr_4292 0.23 +0.6 5,119,173 - Psyr_4292 0.23 +0.5 5,119,173 - Psyr_4292 0.23 +0.6 5,119,173 - Psyr_4292 0.23 -0.7 5,119,173 - Psyr_4292 0.23 -0.1 5,119,231 + Psyr_4292 0.32 -1.2 5,119,231 + Psyr_4292 0.32 -0.2 5,119,276 + Psyr_4292 0.40 +1.1 5,119,276 + Psyr_4292 0.40 +0.4 5,119,277 - Psyr_4292 0.40 -2.3 5,119,277 - Psyr_4292 0.40 +0.4 5,119,277 - Psyr_4292 0.40 -1.7 5,119,327 - Psyr_4292 0.49 -0.1 5,119,327 - Psyr_4292 0.49 +1.1 5,119,328 + Psyr_4292 0.49 -2.5 5,119,328 + Psyr_4292 0.49 -0.9 5,119,328 + Psyr_4292 0.49 +0.1 5,119,328 + Psyr_4292 0.49 -0.1 5,119,328 + Psyr_4292 0.49 +0.6 5,119,328 + Psyr_4292 0.49 +3.9 5,119,328 + Psyr_4292 0.49 +0.9 5,119,328 + Psyr_4292 0.49 +0.8 5,119,328 + Psyr_4292 0.49 +0.4 5,119,328 + Psyr_4292 0.49 -2.1 5,119,328 + Psyr_4292 0.49 -0.7 5,119,328 + Psyr_4292 0.49 +1.3 5,119,328 + Psyr_4292 0.49 +0.4 5,119,328 + Psyr_4292 0.49 +0.2 5,119,329 - Psyr_4292 0.49 -1.1 5,119,329 - Psyr_4292 0.49 -0.4 5,119,329 - Psyr_4292 0.49 +0.0 5,119,329 - Psyr_4292 0.49 +0.1 5,119,329 - Psyr_4292 0.49 -0.4 5,119,329 - Psyr_4292 0.49 -0.7 5,119,329 - Psyr_4292 0.49 -1.7 5,119,329 - Psyr_4292 0.49 +0.7 5,119,329 - Psyr_4292 0.49 -0.3 5,119,329 - Psyr_4292 0.49 -0.5 5,119,329 - Psyr_4292 0.49 +0.5 5,119,329 - Psyr_4292 0.49 +0.5 5,119,329 - Psyr_4292 0.49 +1.2 5,119,329 - Psyr_4292 0.49 +0.1 5,119,329 - Psyr_4292 0.49 -0.7 5,119,357 + Psyr_4292 0.54 +0.1 5,119,357 + Psyr_4292 0.54 -1.4 5,119,358 - Psyr_4292 0.54 -1.2 5,119,584 + -0.4 5,119,585 - +0.0 5,119,612 + -0.7 5,119,613 - -0.4 5,119,613 - -0.6 5,119,613 - -0.9 5,119,614 + -0.7 5,119,614 + -0.4 5,119,615 - +0.2 5,119,615 - +0.8 5,119,615 - +0.1 5,119,615 - +0.9 5,119,640 + +0.5 5,119,641 - +0.4 5,119,641 - -1.0 5,119,703 + +0.3 5,119,703 + -0.9 5,119,703 + -0.5 5,119,703 + +0.3 5,119,757 - Psyr_4293 0.15 -1.0 5,119,895 - Psyr_4293 0.31 -0.7 5,119,895 - Psyr_4293 0.31 -0.4 5,119,906 + Psyr_4293 0.32 -0.2 5,119,906 + Psyr_4293 0.32 -0.9 5,119,906 + Psyr_4293 0.32 -0.8 5,119,907 - Psyr_4293 0.32 -0.9 5,119,907 - Psyr_4293 0.32 -0.4 5,119,907 - Psyr_4293 0.32 -0.3 5,119,907 - Psyr_4293 0.32 +1.0 5,119,907 - Psyr_4293 0.32 +0.1 5,119,960 + Psyr_4293 0.38 +0.4 5,119,960 + Psyr_4293 0.38 +1.6 5,119,960 + Psyr_4293 0.38 +2.1 5,119,961 - Psyr_4293 0.39 -0.8 5,119,961 - Psyr_4293 0.39 +0.1 5,119,961 - Psyr_4293 0.39 -1.2 5,119,961 - Psyr_4293 0.39 -0.4 5,119,961 - Psyr_4293 0.39 -1.8 5,120,269 + Psyr_4293 0.74 -0.3 5,120,420 + -0.9 5,120,510 + +0.6 5,120,510 + -0.9 5,120,511 - -1.1 5,120,511 - -0.5 5,120,511 - +0.4 5,120,511 - -0.8 5,120,529 + +0.0 5,120,529 + -0.5 5,120,530 - -1.2 5,120,593 + -0.5 5,120,594 - -0.7 5,120,594 - +0.7 5,120,601 + +0.4 5,120,601 + -0.9 5,120,602 - -1.4 5,120,602 - +1.2 5,120,602 - +0.3 5,120,602 - +0.2 5,120,602 - +1.1 5,120,602 - -1.1 5,120,602 - -0.2 5,120,615 + -0.4 5,120,616 - +1.2 5,120,616 - -0.1 5,120,974 + Psyr_4294 0.59 -0.1 5,120,974 + Psyr_4294 0.59 +0.6 5,120,975 - Psyr_4294 0.60 +1.6 5,120,975 - Psyr_4294 0.60 +0.5 5,120,975 - Psyr_4294 0.60 -0.3 5,121,285 + -2.1 5,121,286 - +0.6 5,121,340 - -0.2 5,121,343 + +0.6 5,121,343 + +0.4 5,121,343 + +1.5 5,121,343 + -0.1 5,121,343 + +1.6 5,121,343 + +0.5 5,121,343 + -0.9 5,121,343 + -1.4 5,121,343 + -1.2 5,121,343 + -0.5 5,121,343 + +0.4 5,121,344 - -0.1 5,121,344 - -0.9 5,121,344 - +0.7 5,121,344 - +0.5 5,121,344 - +0.7 5,121,344 - +0.5 5,121,355 + +0.5 5,121,355 + -0.5 5,121,355 + -0.0 5,121,356 - +1.1 5,121,418 + Psyr_4295 0.10 -0.8 5,121,418 + Psyr_4295 0.10 +0.6 5,121,418 + Psyr_4295 0.10 -0.7 5,121,419 - Psyr_4295 0.10 -0.7 5,121,419 - Psyr_4295 0.10 +0.5 5,121,455 + Psyr_4295 0.14 -0.5 5,121,455 + Psyr_4295 0.14 +0.3 5,121,456 - Psyr_4295 0.14 -0.2 5,121,456 - Psyr_4295 0.14 +0.2
Or see this region's nucleotide sequence