Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3301

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
3,949,006	+		Psyr_3300	0.72	+0.7
3,949,007	-		Psyr_3300	0.72	+0.3
3,949,205	+				-2.7
3,949,205	+				+0.4
3,949,205	+				-0.0
3,949,205	+				-1.9
3,949,205	+				+0.0
3,949,205	+				-0.5
3,949,205	+				-1.8
3,949,206	-				-2.0
3,949,206	-				-0.2
3,949,206	-				-1.3
3,949,206	-				-0.3
3,949,206	-				-1.9
3,949,206	-				-0.6
3,949,206	-				+1.8
3,949,206	-				+0.7
3,949,206	-				+0.2
3,949,287	-				-0.8
3,949,320	+				+1.1
3,949,335	+				-1.7
3,949,530	+				-0.9
3,949,530	+				+0.7
3,949,531	-				+0.7
3,949,543	-				+0.1
3,949,588	+				+1.7
3,949,592	+				-0.9
3,949,614	+				-0.9
3,949,614	+				-2.5
3,949,614	+				+2.1
3,949,614	+				+1.0
3,949,614	+				-1.5
3,949,614	+				-0.9
3,949,614	+				+0.7
3,949,614	+				-1.3
3,949,614	+				-2.3
3,949,614	+				-0.9
3,949,614	+				-0.9
3,949,614	+				-0.9
3,949,615	-				+0.3
3,949,615	-				-1.9
3,949,615	-				+0.5
3,949,615	-				-1.3
3,949,615	-				-1.0
3,949,615	-				+0.8
3,949,615	-				-0.8
3,949,615	-				-0.6
3,949,616	+				+0.4
3,949,616	+				+0.3
3,949,616	+				-0.0
3,949,616	+				-0.5
3,949,616	+				+2.2
3,949,616	+				+0.8
3,949,616	+				-1.8
3,949,616	+				+0.2
3,949,617	-				+1.5
3,949,617	-				-1.0
3,949,617	-				+1.1
3,949,617	-				+1.1
3,949,617	-				+0.9
3,949,617	-				+0.2
3,949,617	-				+0.7
3,949,617	-				-1.3
3,949,617	-				+0.9
3,949,617	-				+0.2
3,949,618	+				-2.2
3,949,618	+				+0.2
3,949,618	+				+0.7
3,949,618	+				+0.4
3,949,618	+				-0.0
3,949,618	+				-0.7
3,949,618	+				-0.5
3,949,619	-				+0.7
3,949,619	-				+1.7
3,949,627	-				+0.0
3,949,630	+				-0.1
3,949,631	-				-0.3
3,949,655	+				-1.1
3,949,655	+				-0.7
3,949,656	-				+0.2
3,949,656	-				-0.1
3,949,698	-				+0.9
3,949,698	-				+1.7
3,949,730	+				-0.7
3,949,730	+				-1.3
3,949,730	+				-0.6
3,949,730	+				+1.7
3,949,731	-				+1.0
3,949,767	-				-0.1
3,949,767	-				+2.4
3,949,787	-				+0.7
3,949,787	-				+0.8
3,949,787	-				-1.1
3,949,841	+				-0.2
3,949,841	+				+0.2
3,949,841	+				-0.3
3,949,946	+		Psyr_3301	0.11	-1.3
3,949,946	+		Psyr_3301	0.11	-0.5
3,949,946	+		Psyr_3301	0.11	-0.2
3,949,946	+		Psyr_3301	0.11	+0.8
3,949,946	+		Psyr_3301	0.11	+0.2
3,949,946	+		Psyr_3301	0.11	-0.3
3,949,946	+		Psyr_3301	0.11	+2.2
3,949,947	-		Psyr_3301	0.11	-0.5
3,949,947	-		Psyr_3301	0.11	-1.7
3,949,947	-		Psyr_3301	0.11	-1.5
3,949,947	-		Psyr_3301	0.11	-1.7
3,949,947	-		Psyr_3301	0.11	+1.1
3,949,947	-		Psyr_3301	0.11	+0.4
3,949,947	-		Psyr_3301	0.11	-0.5
3,950,010	-		Psyr_3301	0.16	+0.0
3,950,121	-		Psyr_3301	0.23	-0.8
3,950,150	+		Psyr_3301	0.25	+0.1
3,950,151	-		Psyr_3301	0.25	+0.2
3,950,288	+		Psyr_3301	0.35	-0.9
3,950,289	-		Psyr_3301	0.35	-0.3
3,950,480	+		Psyr_3301	0.48	-1.3
3,950,480	+		Psyr_3301	0.48	-0.3
3,950,480	+		Psyr_3301	0.48	-0.6
3,950,480	+		Psyr_3301	0.48	-2.9
3,950,480	+		Psyr_3301	0.48	-1.2
3,950,480	+		Psyr_3301	0.48	+2.0
3,950,480	+		Psyr_3301	0.48	+0.2
3,950,481	-		Psyr_3301	0.48	+0.2
3,950,481	-		Psyr_3301	0.48	-0.8
3,950,481	-		Psyr_3301	0.48	-0.6
3,950,481	-		Psyr_3301	0.48	+0.4
3,950,765	+		Psyr_3301	0.68	-0.3
3,950,766	-		Psyr_3301	0.68	-0.1
3,951,020	+		Psyr_3301	0.86	-0.4
3,951,020	+		Psyr_3301	0.86	-0.1
3,951,020	+		Psyr_3301	0.86	-0.5
3,951,020	+		Psyr_3301	0.86	-0.2
3,951,020	+		Psyr_3301	0.86	+0.3
3,951,021	-		Psyr_3301	0.86	+0.4
3,951,021	-		Psyr_3301	0.86	-0.6
3,951,021	-		Psyr_3301	0.86	+0.7
3,951,021	-				-0.9
3,951,021	-		Psyr_3301	0.86	-0.3
3,951,021	-		Psyr_3301	0.86	+0.7
3,951,137	+				+0.1
3,951,137	+				+0.2
3,951,137	+				+1.2
3,951,137	+				-0.3
3,951,138	-				-0.9
3,951,138	-				+0.2
3,951,138	-				-0.3
3,951,138	-				-0.1
3,951,138	-				+0.4
3,951,138	-				+1.2
3,951,141	+				+1.1
3,951,142	-				-1.2
3,951,170	+				+1.0
3,951,170	+				-2.9
3,951,170	+				+2.1
3,951,170	+				+0.7
3,951,170	+				+1.5
3,951,170	+				-0.3
3,951,171	-				-2.0
3,951,171	-				-1.2
3,951,171	-				-0.5
3,951,171	-				+0.8
3,951,202	-				+0.8
3,951,218	+				+0.2
3,951,218	+				+0.0
3,951,218	+				-0.1
3,951,218	+				+1.7
3,951,412	+		Psyr_3302	0.13	+1.7
3,951,495	+		Psyr_3302	0.19	+0.4
3,951,495	+		Psyr_3302	0.19	-0.2
3,951,542	-		Psyr_3302	0.22	-0.3
3,951,720	-		Psyr_3302	0.34	-0.2
3,951,788	-		Psyr_3302	0.39	-0.3
3,952,114	+		Psyr_3302	0.61	-0.9
3,952,114	+		Psyr_3302	0.61	-1.9
3,952,115	-		Psyr_3302	0.61	-0.2
3,952,115	-		Psyr_3302	0.61	+0.5
3,952,115	-		Psyr_3302	0.61	+0.7
3,952,156	+		Psyr_3302	0.64	-0.6
3,952,156	+		Psyr_3302	0.64	-1.8
3,952,156	+		Psyr_3302	0.64	-0.7
3,952,156	+		Psyr_3302	0.64	-0.9
3,952,156	+		Psyr_3302	0.64	+0.1
3,952,157	-		Psyr_3302	0.64	+1.4
3,952,157	-		Psyr_3302	0.64	+0.1
3,952,157	-		Psyr_3302	0.64	-0.1