Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2431

Experiment: KB with Fusaric 250 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Fusaric 250 ug/ml
2,812,052	+		Psyr_2429	0.88	-0.3
2,812,052	+		Psyr_2429	0.88	+0.7
2,812,113	-				-0.1
2,812,178	-				+0.9
2,812,205	+				-0.3
2,812,205	+				-0.5
2,812,205	+				-0.1
2,812,256	+				-1.9
2,812,256	+				-0.5
2,812,257	-				-0.5
2,812,257	-				+0.2
2,812,269	-				-0.9
2,812,320	-		Psyr_2430	0.13	+1.3
2,812,454	+		Psyr_2430	0.47	+1.0
2,812,455	-		Psyr_2430	0.47	-0.9
2,812,478	+		Psyr_2430	0.53	+0.7
2,812,478	+		Psyr_2430	0.53	+0.3
2,812,479	-		Psyr_2430	0.53	-0.3
2,812,479	-		Psyr_2430	0.53	-2.5
2,812,490	+		Psyr_2430	0.56	-0.3
2,812,570	+		Psyr_2430	0.76	-0.6
2,812,570	+		Psyr_2430	0.76	+0.3
2,812,570	+		Psyr_2430	0.76	+0.1
2,812,571	-		Psyr_2430	0.76	-0.9
2,812,616	+		Psyr_2430	0.87	-1.0
2,812,616	+		Psyr_2430	0.87	+0.2
2,812,617	-		Psyr_2430	0.88	+0.4
2,812,617	-		Psyr_2430	0.88	-1.1
2,812,682	-				+0.5
2,812,682	-				-2.1
2,812,701	+				+0.6
2,812,701	+				-0.0
2,812,701	+				+0.4
2,812,701	+				-0.0
2,812,702	-				+0.1
2,812,702	-				+2.5
2,812,748	-				-0.1
2,812,870	+				+0.9
2,812,871	-				-0.2
2,812,875	+				+1.7
2,812,875	+				-1.4
2,812,925	-				+0.1
2,813,032	+				-0.8
2,813,554	+		Psyr_2431	0.52	+1.0
2,813,554	+		Psyr_2431	0.52	-1.1
2,813,554	+		Psyr_2431	0.52	+0.7
2,813,554	+		Psyr_2431	0.52	+0.8
2,813,555	-		Psyr_2431	0.52	+1.1
2,813,555	-		Psyr_2431	0.52	+0.4
2,813,555	-		Psyr_2431	0.52	-0.3
2,813,555	-		Psyr_2431	0.52	+1.0
2,813,564	+		Psyr_2431	0.53	+0.3
2,813,564	+		Psyr_2431	0.53	-0.3
2,813,565	-		Psyr_2431	0.53	-0.5
2,813,685	+		Psyr_2431	0.64	-1.3
2,813,698	+		Psyr_2431	0.65	+0.5
2,813,698	+		Psyr_2431	0.65	+2.1
2,813,698	+		Psyr_2431	0.65	+3.0
2,813,698	+		Psyr_2431	0.65	+0.4
2,813,698	+		Psyr_2431	0.65	-2.3
2,813,698	+		Psyr_2431	0.65	+1.8
2,813,699	-		Psyr_2431	0.65	+0.7
2,813,699	-		Psyr_2431	0.65	+0.4
2,813,699	-		Psyr_2431	0.65	+0.9
2,813,725	+		Psyr_2431	0.67	+0.7
2,813,726	-		Psyr_2431	0.67	+0.5
2,813,726	-		Psyr_2431	0.67	+0.1
2,813,876	-		Psyr_2431	0.81	+1.7
2,813,876	-		Psyr_2431	0.81	-0.1
2,813,876	-		Psyr_2431	0.81	+0.3
2,813,906	+		Psyr_2431	0.83	-3.7
2,813,906	+		Psyr_2431	0.83	+2.3
2,813,906	+				+1.7
2,813,907	-		Psyr_2431	0.83	+0.1
2,814,025	+				+0.7
2,814,025	+				-1.4
2,814,031	+				-1.1
2,814,031	+				+0.2
2,814,031	+				+0.2
2,814,032	-				+1.4
2,814,032	-				+1.7
2,814,032	-				-0.3
2,814,032	-				-0.7
2,814,045	+				-0.1
2,814,069	-				+0.2
2,814,069	-				-1.6
2,814,075	-				-0.1
2,814,162	-				+0.7
2,814,217	-				-1.5
2,814,249	+				-0.6
2,814,250	-				-0.3
2,814,250	-				+0.5
2,814,269	-				+0.5
2,814,269	-				-0.6
2,814,269	-				-0.8
2,814,349	-				+0.3
2,814,476	+				-0.8
2,814,477	-				+0.8
2,814,541	+				+1.3
2,814,542	-				-0.6
2,814,542	-				-0.4
2,814,566	+				+0.7
2,814,566	+				+2.3
2,814,567	-				-0.3
2,814,567	-				-0.4
2,814,770	-		Psyr_2432	0.16	-0.5
2,814,772	+		Psyr_2432	0.17	+0.7
2,814,773	-		Psyr_2432	0.17	+0.2
2,814,846	-		Psyr_2432	0.19	+0.2
2,814,846	-		Psyr_2432	0.19	-0.1
2,814,846	-		Psyr_2432	0.19	+1.7
2,814,846	-		Psyr_2432	0.19	-0.7
2,814,846	-		Psyr_2432	0.19	+0.3
2,814,846	-		Psyr_2432	0.19	-0.6
2,814,846	-		Psyr_2432	0.19	+0.4
2,814,846	-		Psyr_2432	0.19	-0.5
2,814,858	-		Psyr_2432	0.20	+0.7
2,814,858	-		Psyr_2432	0.20	-1.9
2,814,884	+		Psyr_2432	0.20	+0.7
2,814,885	-		Psyr_2432	0.20	-0.5
2,814,890	+		Psyr_2432	0.21	+1.3
2,814,893	+		Psyr_2432	0.21	-1.1
2,814,893	+		Psyr_2432	0.21	+0.1
2,814,893	+		Psyr_2432	0.21	+0.5
2,814,894	-		Psyr_2432	0.21	-1.3
2,814,894	-		Psyr_2432	0.21	-1.1
2,814,894	-		Psyr_2432	0.21	-0.3
2,814,894	-		Psyr_2432	0.21	-0.6
2,814,894	-		Psyr_2432	0.21	+0.2
2,815,050	-		Psyr_2432	0.26	-1.9
2,815,065	+		Psyr_2432	0.27	-0.2
2,815,066	-		Psyr_2432	0.27	-1.3