Experiment: KB with Fusaric 250 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_1241 and Psyr_1242 are separated by 3 nucleotides Psyr_1242 and Psyr_1243 are separated by 14 nucleotides Psyr_1243 and Psyr_1244 are separated by 96 nucleotides Psyr_1244 and Psyr_1245 are separated by 33 nucleotides
Psyr_1241: Psyr_1241 - Fe-S protein assembly chaperone HscA, at 1,397,426 to 1,399,288
_1241
Psyr_1242: Psyr_1242 - Ferredoxin, 2Fe-2S type, at 1,399,292 to 1,399,633
_1242
Psyr_1243: Psyr_1243 - Protein of unknown function DUF528, at 1,399,648 to 1,399,848
_1243
Psyr_1244: Psyr_1244 - nucleoside diphosphate kinase, at 1,399,945 to 1,400,370
_1244
Psyr_1245: Psyr_1245 - 23S rRNA m(2)A-2503 methyltransferase, at 1,400,404 to 1,401,552
_1245
Position (kb) 1399
1400 Strain fitness (log2 ratio) -1
0
1 at 1399.712 kb on + strand, within Psyr_1243 at 1399.713 kb on - strand at 1399.713 kb on - strand, within Psyr_1243 at 1399.876 kb on + strand at 1399.876 kb on + strand at 1399.876 kb on + strand at 1399.876 kb on + strand at 1399.877 kb on - strand at 1399.877 kb on - strand at 1399.877 kb on - strand at 1399.892 kb on + strand at 1399.894 kb on + strand at 1399.894 kb on + strand at 1400.357 kb on + strand at 1400.368 kb on + strand at 1400.475 kb on + strand at 1400.653 kb on - strand, within Psyr_1245 at 1400.669 kb on + strand, within Psyr_1245 at 1400.669 kb on + strand, within Psyr_1245 at 1400.698 kb on + strand, within Psyr_1245 at 1400.698 kb on + strand, within Psyr_1245 at 1400.698 kb on + strand, within Psyr_1245 at 1400.699 kb on - strand, within Psyr_1245 at 1400.699 kb on - strand, within Psyr_1245 at 1400.699 kb on - strand, within Psyr_1245 at 1400.700 kb on + strand, within Psyr_1245 at 1400.701 kb on - strand, within Psyr_1245
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Fusaric 250 ug/ml remove 1,399,712 + Psyr_1243 0.32 -1.4 1,399,713 - -1.5 1,399,713 - Psyr_1243 0.32 +0.8 1,399,876 + +0.6 1,399,876 + -0.3 1,399,876 + +0.2 1,399,876 + +0.0 1,399,877 - +0.8 1,399,877 - -0.2 1,399,877 - -0.5 1,399,892 + -0.8 1,399,894 + -0.0 1,399,894 + +0.5 1,400,357 + +0.1 1,400,368 + +1.3 1,400,475 + +0.4 1,400,653 - Psyr_1245 0.22 -0.6 1,400,669 + Psyr_1245 0.23 +0.8 1,400,669 + Psyr_1245 0.23 -0.5 1,400,698 + Psyr_1245 0.26 +0.7 1,400,698 + Psyr_1245 0.26 +0.5 1,400,698 + Psyr_1245 0.26 +0.4 1,400,699 - Psyr_1245 0.26 -1.1 1,400,699 - Psyr_1245 0.26 +0.1 1,400,699 - Psyr_1245 0.26 -0.2 1,400,700 + Psyr_1245 0.26 +0.8 1,400,701 - Psyr_1245 0.26 -1.0
Or see this region's nucleotide sequence