Experiment: Collected from freezer stock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS03945 and MMJJ_RS03950 are separated by 17 nucleotides MMJJ_RS03950 and MMJJ_RS03955 are separated by 232 nucleotides
MMJJ_RS03945: MMJJ_RS03945 - mechanosensitive ion channel family protein, at 735,951 to 737,006
_RS03945
MMJJ_RS03950: MMJJ_RS03950 - tyrosine--tRNA ligase, at 737,024 to 737,953
_RS03950
MMJJ_RS03955: MMJJ_RS03955 - hypothetical protein, at 738,186 to 738,383
_RS03955
Position (kb) 737
738 Strain fitness (log2 ratio) -2
-1
0
1
2 at 736.024 kb on + strand at 736.035 kb on - strand at 736.035 kb on - strand at 736.035 kb on - strand at 736.036 kb on + strand at 736.047 kb on + strand at 736.049 kb on - strand at 736.049 kb on - strand at 736.050 kb on + strand at 736.054 kb on + strand at 736.054 kb on + strand at 736.054 kb on + strand at 736.054 kb on + strand at 736.098 kb on - strand, within MMJJ_RS03945 at 736.141 kb on + strand, within MMJJ_RS03945 at 736.182 kb on - strand, within MMJJ_RS03945 at 736.182 kb on - strand, within MMJJ_RS03945 at 736.183 kb on + strand, within MMJJ_RS03945 at 736.185 kb on - strand, within MMJJ_RS03945 at 736.226 kb on + strand, within MMJJ_RS03945 at 736.355 kb on - strand, within MMJJ_RS03945 at 736.356 kb on + strand, within MMJJ_RS03945 at 736.356 kb on + strand, within MMJJ_RS03945 at 736.416 kb on + strand, within MMJJ_RS03945 at 736.553 kb on - strand, within MMJJ_RS03945 at 736.554 kb on + strand, within MMJJ_RS03945 at 736.628 kb on - strand, within MMJJ_RS03945 at 736.629 kb on + strand, within MMJJ_RS03945 at 736.660 kb on - strand, within MMJJ_RS03945 at 736.661 kb on + strand, within MMJJ_RS03945 at 736.661 kb on + strand, within MMJJ_RS03945 at 736.665 kb on - strand, within MMJJ_RS03945 at 736.666 kb on + strand, within MMJJ_RS03945 at 736.666 kb on + strand, within MMJJ_RS03945 at 736.671 kb on - strand, within MMJJ_RS03945 at 736.671 kb on - strand, within MMJJ_RS03945 at 736.671 kb on - strand, within MMJJ_RS03945 at 736.671 kb on - strand, within MMJJ_RS03945 at 736.672 kb on + strand, within MMJJ_RS03945 at 736.672 kb on + strand, within MMJJ_RS03945 at 736.673 kb on - strand, within MMJJ_RS03945 at 736.764 kb on - strand, within MMJJ_RS03945 at 736.843 kb on + strand, within MMJJ_RS03945 at 736.845 kb on - strand, within MMJJ_RS03945 at 736.854 kb on - strand, within MMJJ_RS03945 at 736.891 kb on - strand, within MMJJ_RS03945 at 736.892 kb on + strand, within MMJJ_RS03945 at 736.892 kb on + strand, within MMJJ_RS03945 at 736.892 kb on + strand, within MMJJ_RS03945 at 736.895 kb on - strand, within MMJJ_RS03945 at 736.905 kb on - strand at 736.906 kb on + strand at 736.909 kb on - strand at 736.909 kb on - strand at 736.909 kb on - strand at 736.910 kb on + strand at 736.948 kb on + strand at 737.901 kb on + strand at 737.941 kb on - strand at 738.035 kb on - strand at 738.047 kb on - strand at 738.048 kb on + strand at 738.050 kb on - strand at 738.050 kb on - strand at 738.071 kb on - strand at 738.072 kb on + strand at 738.073 kb on - strand at 738.092 kb on - strand at 738.173 kb on - strand at 738.174 kb on + strand at 738.178 kb on - strand at 738.179 kb on + strand at 738.183 kb on + strand at 738.231 kb on + strand, within MMJJ_RS03955 at 738.233 kb on - strand, within MMJJ_RS03955 at 738.233 kb on - strand, within MMJJ_RS03955 at 738.233 kb on - strand, within MMJJ_RS03955 at 738.233 kb on - strand, within MMJJ_RS03955 at 738.233 kb on - strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.234 kb on + strand, within MMJJ_RS03955 at 738.235 kb on - strand, within MMJJ_RS03955 at 738.235 kb on - strand, within MMJJ_RS03955 at 738.235 kb on - strand, within MMJJ_RS03955 at 738.237 kb on - strand, within MMJJ_RS03955 at 738.237 kb on - strand, within MMJJ_RS03955 at 738.237 kb on - strand, within MMJJ_RS03955 at 738.237 kb on - strand, within MMJJ_RS03955 at 738.238 kb on + strand, within MMJJ_RS03955 at 738.243 kb on + strand, within MMJJ_RS03955 at 738.288 kb on - strand, within MMJJ_RS03955 at 738.289 kb on + strand, within MMJJ_RS03955 at 738.293 kb on - strand, within MMJJ_RS03955 at 738.293 kb on - strand, within MMJJ_RS03955 at 738.311 kb on - strand, within MMJJ_RS03955 at 738.329 kb on - strand, within MMJJ_RS03955 at 738.378 kb on - strand at 738.378 kb on - strand at 738.378 kb on - strand at 738.378 kb on - strand at 738.400 kb on + strand at 738.401 kb on - strand at 738.402 kb on + strand at 738.402 kb on + strand at 738.402 kb on + strand at 738.402 kb on + strand at 738.405 kb on - strand at 738.405 kb on - strand at 738.405 kb on - strand at 738.406 kb on + strand at 738.406 kb on + strand at 738.407 kb on - strand at 738.407 kb on - strand at 738.407 kb on - strand at 738.407 kb on - strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.408 kb on + strand at 738.427 kb on - strand at 738.428 kb on + strand at 738.428 kb on + strand at 738.561 kb on - strand at 738.600 kb on - strand at 738.606 kb on + strand at 738.624 kb on - strand at 738.714 kb on - strand at 738.740 kb on + strand at 738.740 kb on + strand at 738.753 kb on - strand at 738.753 kb on - strand at 738.753 kb on - strand at 738.779 kb on - strand at 738.785 kb on - strand at 738.785 kb on - strand at 738.785 kb on - strand at 738.786 kb on + strand at 738.786 kb on + strand at 738.786 kb on + strand at 738.796 kb on - strand at 738.796 kb on - strand at 738.800 kb on - strand at 738.818 kb on - strand at 738.869 kb on - strand at 738.869 kb on - strand at 738.870 kb on + strand at 738.870 kb on + strand at 738.870 kb on + strand at 738.871 kb on - strand at 738.871 kb on - strand at 738.874 kb on + strand at 738.874 kb on + strand at 738.874 kb on + strand at 738.874 kb on + strand at 738.874 kb on + strand at 738.918 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.950 kb on - strand at 738.951 kb on + strand at 738.951 kb on + strand at 738.951 kb on + strand at 738.951 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Collected from freezer stock remove 736,024 + +0.2 736,035 - +0.4 736,035 - +0.1 736,035 - -0.3 736,036 + -0.5 736,047 + +0.4 736,049 - -0.9 736,049 - +1.5 736,050 + +0.1 736,054 + +0.6 736,054 + +0.2 736,054 + +2.3 736,054 + +0.1 736,098 - MMJJ_RS03945 0.14 +0.4 736,141 + MMJJ_RS03945 0.18 +0.2 736,182 - MMJJ_RS03945 0.22 +1.9 736,182 - MMJJ_RS03945 0.22 -0.3 736,183 + MMJJ_RS03945 0.22 +0.0 736,185 - MMJJ_RS03945 0.22 +0.4 736,226 + MMJJ_RS03945 0.26 +0.6 736,355 - MMJJ_RS03945 0.38 +0.3 736,356 + MMJJ_RS03945 0.38 +0.1 736,356 + MMJJ_RS03945 0.38 +0.7 736,416 + MMJJ_RS03945 0.44 -0.9 736,553 - MMJJ_RS03945 0.57 +0.2 736,554 + MMJJ_RS03945 0.57 -0.3 736,628 - MMJJ_RS03945 0.64 -0.8 736,629 + MMJJ_RS03945 0.64 -0.0 736,660 - MMJJ_RS03945 0.67 +0.3 736,661 + MMJJ_RS03945 0.67 +0.0 736,661 + MMJJ_RS03945 0.67 +0.2 736,665 - MMJJ_RS03945 0.68 -0.3 736,666 + MMJJ_RS03945 0.68 +0.9 736,666 + MMJJ_RS03945 0.68 -0.1 736,671 - MMJJ_RS03945 0.68 +0.5 736,671 - MMJJ_RS03945 0.68 +0.7 736,671 - MMJJ_RS03945 0.68 -0.2 736,671 - MMJJ_RS03945 0.68 -1.4 736,672 + MMJJ_RS03945 0.68 +0.7 736,672 + MMJJ_RS03945 0.68 -0.6 736,673 - MMJJ_RS03945 0.68 +0.4 736,764 - MMJJ_RS03945 0.77 +0.3 736,843 + MMJJ_RS03945 0.84 -0.1 736,845 - MMJJ_RS03945 0.85 -0.3 736,854 - MMJJ_RS03945 0.86 -0.0 736,891 - MMJJ_RS03945 0.89 +0.5 736,892 + MMJJ_RS03945 0.89 -0.7 736,892 + MMJJ_RS03945 0.89 +0.5 736,892 + MMJJ_RS03945 0.89 -0.3 736,895 - MMJJ_RS03945 0.89 -0.2 736,905 - -0.2 736,906 + +0.2 736,909 - -0.3 736,909 - -0.4 736,909 - +0.5 736,910 + -0.9 736,948 + -0.1 737,901 + +0.0 737,941 - -0.1 738,035 - -0.1 738,047 - +0.5 738,048 + -0.7 738,050 - +0.9 738,050 - -0.0 738,071 - -0.7 738,072 + -2.3 738,073 - +0.3 738,092 - +0.5 738,173 - -0.5 738,174 + -0.9 738,178 - +0.3 738,179 + -1.3 738,183 + +0.5 738,231 + MMJJ_RS03955 0.23 +0.0 738,233 - MMJJ_RS03955 0.24 +0.4 738,233 - MMJJ_RS03955 0.24 -0.5 738,233 - MMJJ_RS03955 0.24 -0.6 738,233 - MMJJ_RS03955 0.24 -0.6 738,233 - MMJJ_RS03955 0.24 -0.2 738,234 + MMJJ_RS03955 0.24 -0.4 738,234 + MMJJ_RS03955 0.24 -0.7 738,234 + MMJJ_RS03955 0.24 +1.5 738,234 + MMJJ_RS03955 0.24 -0.1 738,234 + MMJJ_RS03955 0.24 -0.7 738,234 + MMJJ_RS03955 0.24 +0.2 738,235 - MMJJ_RS03955 0.25 -0.9 738,235 - MMJJ_RS03955 0.25 +0.9 738,235 - MMJJ_RS03955 0.25 +0.1 738,237 - MMJJ_RS03955 0.26 +0.5 738,237 - MMJJ_RS03955 0.26 +0.0 738,237 - MMJJ_RS03955 0.26 -0.0 738,237 - MMJJ_RS03955 0.26 -0.1 738,238 + MMJJ_RS03955 0.26 -0.6 738,243 + MMJJ_RS03955 0.29 -0.6 738,288 - MMJJ_RS03955 0.52 -0.4 738,289 + MMJJ_RS03955 0.52 -1.6 738,293 - MMJJ_RS03955 0.54 +0.0 738,293 - MMJJ_RS03955 0.54 +0.4 738,311 - MMJJ_RS03955 0.63 +1.2 738,329 - MMJJ_RS03955 0.72 +0.1 738,378 - +0.0 738,378 - -0.7 738,378 - -0.3 738,378 - +0.3 738,400 + +0.9 738,401 - +0.1 738,402 + +1.3 738,402 + +0.2 738,402 + -0.8 738,402 + -1.2 738,405 - -0.2 738,405 - -1.2 738,405 - +1.0 738,406 + -0.2 738,406 + -0.6 738,407 - +0.1 738,407 - +0.1 738,407 - -0.6 738,407 - +0.5 738,408 + +0.3 738,408 + +0.5 738,408 + -0.3 738,408 + -0.7 738,408 + -0.6 738,408 + +1.6 738,408 + -0.7 738,408 + +0.5 738,427 - +0.2 738,428 + -1.1 738,428 + +0.2 738,561 - -0.1 738,600 - -0.5 738,606 + -0.1 738,624 - +0.6 738,714 - +2.7 738,740 + -1.1 738,740 + +0.0 738,753 - +0.1 738,753 - +1.3 738,753 - +0.3 738,779 - -0.4 738,785 - -0.3 738,785 - -0.1 738,785 - +0.2 738,786 + -0.1 738,786 + +0.4 738,786 + -0.9 738,796 - +0.5 738,796 - -0.5 738,800 - -0.2 738,818 - -0.2 738,869 - +0.0 738,869 - +0.7 738,870 + -0.7 738,870 + +0.1 738,870 + +0.2 738,871 - +0.4 738,871 - +0.2 738,874 + +0.4 738,874 + +0.5 738,874 + -0.1 738,874 + +0.5 738,874 + +0.9 738,918 - +0.3 738,950 - -0.1 738,950 - +0.1 738,950 - +0.2 738,950 - -0.0 738,950 - +0.0 738,950 - +0.3 738,950 - -0.2 738,950 - +1.1 738,951 + +0.2 738,951 + -0.5 738,951 + -0.4 738,951 + +0.5
Or see this region's nucleotide sequence