Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03519

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,675,832	+		CCNA_03518	0.34	-0.9
3,675,840	-		CCNA_03518	0.35	-0.1
3,675,840	-		CCNA_03518	0.35	+0.9
3,675,856	+		CCNA_03518	0.37	-1.6
3,675,925	-		CCNA_03518	0.44	+0.2
3,675,932	+		CCNA_03518	0.45	+1.1
3,675,934	-		CCNA_03518	0.45	+0.7
3,675,940	-		CCNA_03518	0.46	+1.2
3,675,950	-		CCNA_03518	0.47	+3.0
3,675,952	-		CCNA_03518	0.47	+1.1
3,675,952	-		CCNA_03518	0.47	+1.1
3,675,952	-		CCNA_03518	0.47	+0.9
3,676,020	-		CCNA_03518	0.54	+1.0
3,676,046	-		CCNA_03518	0.57	-0.1
3,676,046	-		CCNA_03518	0.57	+0.4
3,676,046	-		CCNA_03518	0.57	+0.1
3,676,122	-		CCNA_03518	0.65	+0.8
3,676,127	-		CCNA_03518	0.66	-0.5
3,676,132	-		CCNA_03518	0.66	+1.5
3,676,132	-		CCNA_03518	0.66	+0.8
3,676,132	-		CCNA_03518	0.66	+0.7
3,676,210	-		CCNA_03518	0.75	+0.9
3,676,224	-		CCNA_03518	0.76	+0.7
3,676,232	-		CCNA_03518	0.77	+0.7
3,676,414	-				+1.2
3,676,448	+				-0.7
3,676,486	+				-1.4
3,676,496	+				-1.7
3,676,509	+				-2.7
3,676,514	-				+1.1
3,676,527	-				-0.9
3,676,541	-				-0.5
3,676,547	+				-2.2
3,676,577	-				+1.6
3,676,614	+				-1.3
3,676,614	+				+0.1
3,676,614	+				+0.7
3,676,622	-				-1.3
3,676,646	-				-1.0
3,676,650	+				-0.7
3,676,650	+				-0.6
3,676,650	+				-1.5
3,676,650	+				-0.9
3,676,661	-				-1.8
3,676,785	+				+0.4
3,676,793	-				+1.6
3,676,804	-				+2.3
3,676,806	+				+1.9
3,676,874	+		CCNA_03519	0.17	+3.1
3,676,923	+		CCNA_03519	0.32	+0.6
3,676,944	+		CCNA_03519	0.39	+2.7
3,676,957	+		CCNA_03519	0.43	+2.6
3,676,994	+		CCNA_03519	0.54	+3.0
3,677,005	+		CCNA_03519	0.57	+3.5
3,677,016	+		CCNA_03519	0.61	+2.7
3,677,040	+		CCNA_03519	0.68	+2.1
3,677,112	+				+2.9
3,677,120	-				-1.2
3,677,120	-				+1.2
3,677,146	-				-2.8
3,677,179	-				-2.8
3,677,212	+		CCNA_03520	0.13	-0.2
3,677,244	-		CCNA_03520	0.18	-0.6
3,677,244	-		CCNA_03520	0.18	-1.1
3,677,298	-		CCNA_03520	0.28	+2.5
3,677,334	+		CCNA_03520	0.34	-0.3
3,677,334	+		CCNA_03520	0.34	-1.7
3,677,342	-		CCNA_03520	0.36	-0.2
3,677,342	-		CCNA_03520	0.36	-1.7
3,677,365	+		CCNA_03520	0.40	+0.9
3,677,365	+		CCNA_03520	0.40	+2.9
3,677,373	-		CCNA_03520	0.41	-1.1
3,677,378	+		CCNA_03520	0.42	+0.8
3,677,398	-		CCNA_03520	0.46	-0.0
3,677,400	+		CCNA_03520	0.46	+2.7
3,677,408	-		CCNA_03520	0.47	+1.1
3,677,429	-		CCNA_03520	0.51	-0.0
3,677,437	+		CCNA_03520	0.52	-0.3
3,677,437	+		CCNA_03520	0.52	+0.8
3,677,437	+		CCNA_03520	0.52	+0.8
3,677,437	+		CCNA_03520	0.52	+2.5
3,677,437	+		CCNA_03520	0.52	-0.5
3,677,437	+		CCNA_03520	0.52	-1.0
3,677,437	+		CCNA_03520	0.52	-0.6
3,677,437	+		CCNA_03520	0.52	-0.4
3,677,445	-		CCNA_03520	0.54	-1.4
3,677,445	-		CCNA_03520	0.54	-2.1
3,677,445	-		CCNA_03520	0.54	+0.7
3,677,445	-		CCNA_03520	0.54	-1.6
3,677,445	-		CCNA_03520	0.54	+1.7
3,677,445	-		CCNA_03520	0.54	-0.7
3,677,445	-		CCNA_03520	0.54	-0.6
3,677,445	-		CCNA_03520	0.54	-0.5
3,677,470	+		CCNA_03520	0.58	+0.5
3,677,474	-		CCNA_03520	0.59	-1.0
3,677,504	+		CCNA_03520	0.64	-0.3
3,677,512	-		CCNA_03520	0.66	-0.6
3,677,552	+		CCNA_03520	0.73	+0.5
3,677,609	+		CCNA_03520	0.83	-0.5
3,677,617	-		CCNA_03520	0.84	+0.4
3,677,648	-				-3.3
3,677,675	-				-1.7
3,677,677	+				+1.9
3,677,677	+				-0.7
3,677,677	+				+0.1
3,677,695	-				-2.3
3,677,698	+				+1.1
3,677,705	+				+2.9
3,677,706	-				-3.1
3,677,706	-				-0.1
3,677,706	-				-1.7
3,677,713	-				-0.7
3,677,783	-				-2.3
3,677,807	+		CCNA_03521	0.13	-0.5
3,677,807	+		CCNA_03521	0.13	-1.0
3,677,807	+		CCNA_03521	0.13	-1.9
3,677,807	+		CCNA_03521	0.13	-0.7
3,677,807	+		CCNA_03521	0.13	-2.0
3,677,807	+		CCNA_03521	0.13	+0.9
3,677,815	-		CCNA_03521	0.14	-0.1
3,677,815	-		CCNA_03521	0.14	-0.9
3,677,815	-		CCNA_03521	0.14	-1.5
3,677,821	+		CCNA_03521	0.14	+0.9
3,677,826	+		CCNA_03521	0.15	-2.0
3,677,829	-		CCNA_03521	0.15	-1.2
3,677,880	+		CCNA_03521	0.21	-2.2
3,677,880	+		CCNA_03521	0.21	-0.6
3,677,889	+		CCNA_03521	0.22	-0.9
3,677,897	-		CCNA_03521	0.23	-0.4
3,677,952	+		CCNA_03521	0.30	-0.7
3,677,955	-		CCNA_03521	0.30	-3.4
3,677,960	-		CCNA_03521	0.31	-0.8
3,677,960	-		CCNA_03521	0.31	+0.4
3,677,960	-		CCNA_03521	0.31	+0.3
3,677,960	-		CCNA_03521	0.31	+1.7
3,677,960	-		CCNA_03521	0.31	+1.1
3,677,962	+		CCNA_03521	0.31	+1.3
3,678,026	+		CCNA_03521	0.39	+0.5
3,678,029	-		CCNA_03521	0.39	+1.6
3,678,029	-		CCNA_03521	0.39	-2.9
3,678,043	+		CCNA_03521	0.41	-0.6
3,678,048	+		CCNA_03521	0.41	-1.2
3,678,048	+		CCNA_03521	0.41	+0.9
3,678,048	+		CCNA_03521	0.41	-0.3
3,678,048	+		CCNA_03521	0.41	-1.3
3,678,048	+		CCNA_03521	0.41	-0.6
3,678,048	+		CCNA_03521	0.41	+1.1
3,678,051	-		CCNA_03521	0.42	-1.5
3,678,056	-		CCNA_03521	0.42	+0.6
3,678,056	-		CCNA_03521	0.42	-1.0
3,678,056	-		CCNA_03521	0.42	-0.8
3,678,056	-		CCNA_03521	0.42	+0.5
3,678,063	+		CCNA_03521	0.43	-1.4
3,678,099	+		CCNA_03521	0.48	-0.3
3,678,121	+		CCNA_03521	0.50	-1.4
3,678,143	+		CCNA_03521	0.53	+0.9
3,678,143	+		CCNA_03521	0.53	+0.2
3,678,143	+		CCNA_03521	0.53	+1.1
3,678,143	+		CCNA_03521	0.53	+0.7