Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03095

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,243,018	+		CCNA_03094	0.15	-1.7
3,243,033	+		CCNA_03094	0.16	+0.2
3,243,043	+		CCNA_03094	0.17	+0.1
3,243,051	-		CCNA_03094	0.18	+1.0
3,243,051	-		CCNA_03094	0.18	+1.8
3,243,051	-		CCNA_03094	0.18	+2.4
3,243,131	+		CCNA_03094	0.25	-0.2
3,243,158	+		CCNA_03094	0.28	-0.9
3,243,173	-		CCNA_03094	0.29	-0.2
3,243,178	-		CCNA_03094	0.30	-0.2
3,243,185	-		CCNA_03094	0.30	-1.2
3,243,202	-		CCNA_03094	0.32	-1.7
3,243,231	+		CCNA_03094	0.35	+0.7
3,243,237	+		CCNA_03094	0.35	-1.6
3,243,250	+		CCNA_03094	0.36	-1.7
3,243,250	+		CCNA_03094	0.36	+0.7
3,243,250	+		CCNA_03094	0.36	-2.0
3,243,255	+		CCNA_03094	0.37	+0.3
3,243,258	-		CCNA_03094	0.37	+1.2
3,243,258	-		CCNA_03094	0.37	-0.5
3,243,260	+		CCNA_03094	0.37	+1.8
3,243,268	-		CCNA_03094	0.38	+2.7
3,243,448	-		CCNA_03094	0.55	-0.4
3,243,482	-		CCNA_03094	0.58	+1.4
3,243,521	-		CCNA_03094	0.62	+1.0
3,243,521	-		CCNA_03094	0.62	+1.0
3,243,534	+		CCNA_03094	0.63	+0.1
3,243,540	+		CCNA_03094	0.64	-1.3
3,243,610	+		CCNA_03094	0.70	-0.4
3,243,627	-		CCNA_03094	0.72	+0.8
3,243,665	+		CCNA_03094	0.76	+1.2
3,243,706	-		CCNA_03094	0.80	+1.2
3,243,706	-		CCNA_03094	0.80	+0.1
3,243,746	+		CCNA_03094	0.83	+0.2
3,243,751	+		CCNA_03094	0.84	-2.1
3,243,754	-		CCNA_03094	0.84	-0.9
3,243,754	-		CCNA_03094	0.84	-0.1
3,243,754	-		CCNA_03094	0.84	+1.9
3,243,774	+		CCNA_03094	0.86	+1.0
3,243,782	-		CCNA_03094	0.87	-0.5
3,243,807	-		CCNA_03094	0.89	-0.4
3,243,878	+				-0.4
3,244,048	-				-2.4
3,244,063	-				-1.8
3,244,098	+				+0.3
3,244,143	-		CCNA_03095	0.14	-1.9
3,244,145	+		CCNA_03095	0.14	-1.1
3,244,146	+		CCNA_03095	0.14	-1.6
3,244,148	-		CCNA_03095	0.14	-1.3
3,244,201	+		CCNA_03095	0.19	-1.4
3,244,237	-		CCNA_03095	0.23	-0.3
3,244,242	-		CCNA_03095	0.23	-2.0
3,244,249	+		CCNA_03095	0.24	+0.7
3,244,249	+		CCNA_03095	0.24	+0.3
3,244,253	+		CCNA_03095	0.25	-1.7
3,244,253	+		CCNA_03095	0.25	-0.1
3,244,253	+		CCNA_03095	0.25	-3.0
3,244,257	-		CCNA_03095	0.25	-1.8
3,244,257	-		CCNA_03095	0.25	-2.0
3,244,261	-		CCNA_03095	0.25	-1.8
3,244,261	-		CCNA_03095	0.25	-1.7
3,244,261	-		CCNA_03095	0.25	-1.1
3,244,261	-		CCNA_03095	0.25	-0.8
3,244,322	+		CCNA_03095	0.31	-2.8
3,244,330	-		CCNA_03095	0.32	+0.0
3,244,331	+		CCNA_03095	0.32	-1.3
3,244,331	+		CCNA_03095	0.32	-0.1
3,244,331	+		CCNA_03095	0.32	-0.8
3,244,331	+		CCNA_03095	0.32	+1.0
3,244,336	+		CCNA_03095	0.33	-2.0
3,244,339	-		CCNA_03095	0.33	-0.9
3,244,339	-		CCNA_03095	0.33	-0.3
3,244,344	-		CCNA_03095	0.33	-2.6
3,244,350	+		CCNA_03095	0.34	-0.4
3,244,350	+		CCNA_03095	0.34	-0.7
3,244,355	+		CCNA_03095	0.35	+0.9
3,244,356	-		CCNA_03095	0.35	-1.5
3,244,357	+		CCNA_03095	0.35	-0.2
3,244,358	-		CCNA_03095	0.35	+0.6
3,244,358	-		CCNA_03095	0.35	-0.7
3,244,388	+				+0.6
3,244,388	+		CCNA_03095	0.38	-1.5
3,244,388	+		CCNA_03095	0.38	-0.3
3,244,396	-		CCNA_03095	0.38	-0.5
3,244,401	+		CCNA_03095	0.39	+0.6
3,244,410	+		CCNA_03095	0.40	-1.3
3,244,412	+		CCNA_03095	0.40	-2.2
3,244,412	+		CCNA_03095	0.40	-0.7
3,244,412	+		CCNA_03095	0.40	-0.1
3,244,418	-		CCNA_03095	0.41	-0.4
3,244,418	-		CCNA_03095	0.41	-0.1
3,244,430	-		CCNA_03095	0.42	-1.6
3,244,440	-		CCNA_03095	0.43	+0.4
3,244,440	-		CCNA_03095	0.43	+0.6
3,244,543	+		CCNA_03095	0.53	-0.6
3,244,559	+		CCNA_03095	0.54	-0.5
3,244,588	+		CCNA_03095	0.57	-1.0
3,244,595	+		CCNA_03095	0.58	-0.5
3,244,596	-		CCNA_03095	0.58	+0.2
3,244,618	-		CCNA_03095	0.60	-1.0
3,244,625	-		CCNA_03095	0.61	-1.0
3,244,625	-		CCNA_03095	0.61	+0.3
3,244,625	-		CCNA_03095	0.61	-2.8
3,244,625	-		CCNA_03095	0.61	+0.1
3,244,625	-		CCNA_03095	0.61	+0.2
3,244,688	+		CCNA_03095	0.67	-1.6
3,244,696	-		CCNA_03095	0.68	-1.3
3,244,698	+		CCNA_03095	0.68	+1.9
3,244,708	+		CCNA_03095	0.69	+0.1
3,244,708	+		CCNA_03095	0.69	-0.8
3,244,708	+		CCNA_03095	0.69	-1.0
3,244,708	+		CCNA_03095	0.69	-1.8
3,244,716	-		CCNA_03095	0.70	+1.3
3,244,716	-		CCNA_03095	0.70	-0.9
3,244,716	-		CCNA_03095	0.70	+1.7
3,244,716	-		CCNA_03095	0.70	+0.2
3,244,716	-		CCNA_03095	0.70	+1.4
3,244,730	-		CCNA_03095	0.71	-0.1
3,244,757	+		CCNA_03095	0.74	-2.5
3,244,765	-		CCNA_03095	0.74	-0.3
3,244,771	-		CCNA_03095	0.75	-0.4
3,244,804	+		CCNA_03095	0.78	-0.9
3,244,810	+		CCNA_03095	0.79	+1.1
3,244,812	-		CCNA_03095	0.79	-0.7
3,244,812	-		CCNA_03095	0.79	-1.2
3,244,812	-		CCNA_03095	0.79	-0.5
3,244,888	+		CCNA_03095	0.86	-0.0
3,244,929	+				+1.9
3,244,949	+				-0.9
3,244,957	-				+2.4
3,244,978	+				+1.3
3,244,978	+				+1.7
3,244,985	-				-1.4
3,244,996	+				+0.1
3,245,000	-				+0.3
3,245,005	-				+2.2
3,245,081	+				+0.6
3,245,086	+				-0.2
3,245,086	+				+0.2
3,245,087	-				-0.2
3,245,094	-				+1.3
3,245,094	-				-0.9
3,245,094	-				-0.3
3,245,104	-				+1.1
3,245,110	+				+0.3
3,245,111	+				-1.5
3,245,111	+				+0.6
3,245,111	+				-2.0
3,245,113	-				-0.5
3,245,119	-				-1.8
3,245,123	+				-0.5
3,245,138	+				-0.5
3,245,146	-				+1.1
3,245,187	+				+0.3
3,245,187	+				-1.5
3,245,195	-				+1.2
3,245,195	-				-0.2
3,245,210	+				+0.2
3,245,218	-				+0.4
3,245,220	+				+1.3
3,245,240	+				-1.3
3,245,248	-				+0.3
3,245,269	+				-0.9
3,245,287	-				-1.4
3,245,336	-				+0.4
3,245,336	-				+0.0
3,245,351	+				-0.8
3,245,351	+				-0.1
3,245,351	+				+1.3
3,245,364	+				+2.9
3,245,364	+				+0.4
3,245,364	+				-1.5
3,245,372	-				+0.7
3,245,382	-				+0.7
3,245,382	-				-1.0
3,245,382	-				-3.2
3,245,400	+				-2.3
3,245,405	+				-0.2
3,245,407	+				+1.5
3,245,417	+				-0.2
3,245,417	+				+0.1
3,245,425	-				-0.1
3,245,445	-		CCNA_03096	0.10	-1.2
3,245,458	+		CCNA_03096	0.11	-0.7
3,245,464	+		CCNA_03096	0.11	+0.1
3,245,467	-		CCNA_03096	0.11	-0.7
3,245,472	-		CCNA_03096	0.11	-0.3
3,245,472	-		CCNA_03096	0.11	-1.5
3,245,475	+		CCNA_03096	0.11	-0.8
3,245,507	+		CCNA_03096	0.13	-0.7
3,245,571	-		CCNA_03096	0.15	-0.9
3,245,571	-		CCNA_03096	0.15	-1.2
3,245,573	-		CCNA_03096	0.15	-0.6
3,245,599	-		CCNA_03096	0.16	-0.2
3,245,627	-		CCNA_03096	0.18	+1.4
3,245,628	+		CCNA_03096	0.18	-0.7
3,245,637	+		CCNA_03096	0.18	-0.2
3,245,674	-		CCNA_03096	0.19	-0.9
3,245,675	-		CCNA_03096	0.19	+1.6
3,245,675	-		CCNA_03096	0.19	-1.5
3,245,696	+		CCNA_03096	0.20	+2.7
3,245,716	-		CCNA_03096	0.21	-1.0
3,245,737	+		CCNA_03096	0.22	+0.1
3,245,748	+		CCNA_03096	0.22	-1.3
3,245,764	-		CCNA_03096	0.23	-1.0
3,245,764	-		CCNA_03096	0.23	-1.4
3,245,798	+		CCNA_03096	0.24	+0.1
3,245,902	+		CCNA_03096	0.29	+1.6
3,245,960	+		CCNA_03096	0.31	-2.9
3,245,960	+		CCNA_03096	0.31	-0.4
3,245,960	+		CCNA_03096	0.31	+0.8
3,245,968	-		CCNA_03096	0.31	-0.9
3,245,968	-		CCNA_03096	0.31	-0.5
3,245,976	-		CCNA_03096	0.32	-2.2
3,246,022	+		CCNA_03096	0.33	-1.8