Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03054

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,208,173	+				-1.3
3,208,244	+				+0.9
3,208,252	-				-0.9
3,208,252	-				+0.9
3,208,252	-				-0.9
3,208,256	+				+0.9
3,208,256	+				-1.5
3,208,256	+				+0.7
3,208,256	+				-1.2
3,208,256	+				-1.3
3,208,256	+				+1.2
3,208,256	+				-1.2
3,208,256	+				+2.2
3,208,256	+				+0.8
3,208,256	+				-0.8
3,208,264	-				-0.5
3,208,264	-				+1.6
3,208,264	-				+0.5
3,208,264	-				-0.2
3,208,264	-				+2.1
3,208,264	-				-0.9
3,208,264	-				+1.9
3,208,264	-				-0.5
3,208,270	-				+0.9
3,208,279	+				+0.5
3,208,289	+				-0.3
3,208,300	+				+0.6
3,208,300	+				-0.3
3,208,300	+				+1.0
3,208,308	-				-0.6
3,208,308	-				-0.4
3,208,310	+				+2.1
3,208,323	+				-1.2
3,208,324	-				-0.3
3,208,326	+				-0.7
3,208,326	+				+1.3
3,208,326	+				-1.1
3,208,334	-				+1.1
3,208,334	-				-0.5
3,208,339	-				-0.9
3,208,365	-				-0.3
3,208,376	-				+0.1
3,208,418	+				-0.7
3,208,418	+				+1.0
3,208,418	+				-0.5
3,208,418	+				-0.7
3,208,418	+				+1.1
3,208,426	-				+1.5
3,208,426	-				-0.4
3,208,426	-				-0.4
3,208,426	-				+0.8
3,208,426	-				-0.1
3,208,426	-				+1.8
3,208,426	-				-0.3
3,208,472	+		CCNA_03055	0.14	+0.9
3,208,472	+		CCNA_03055	0.14	-0.3
3,208,472	+		CCNA_03055	0.14	+1.3
3,208,472	+		CCNA_03055	0.14	+0.2
3,208,472	+		CCNA_03055	0.14	-1.9
3,208,480	-		CCNA_03055	0.15	-2.4
3,208,480	-		CCNA_03055	0.15	-1.2
3,208,480	-		CCNA_03055	0.15	+0.4
3,208,480	-		CCNA_03055	0.15	-0.4
3,208,487	+		CCNA_03055	0.16	-2.2
3,208,490	-		CCNA_03055	0.17	-0.7
3,208,532	+		CCNA_03055	0.23	-1.8
3,208,532	+		CCNA_03055	0.23	-1.1
3,208,539	-		CCNA_03055	0.24	-0.9
3,208,540	-		CCNA_03055	0.24	+1.1
3,208,577	-		CCNA_03055	0.30	+0.5
3,208,655	+		CCNA_03055	0.41	-4.1
3,208,655	+		CCNA_03055	0.41	-1.9
3,208,685	+		CCNA_03055	0.46	-1.4
3,208,709	+		CCNA_03055	0.49	-3.1
3,208,709	+		CCNA_03055	0.49	-2.4
3,208,760	-		CCNA_03055	0.57	-0.1
3,208,830	-		CCNA_03055	0.67	+0.9
3,208,830	-		CCNA_03055	0.67	-0.0
3,208,841	-		CCNA_03055	0.68	+0.4
3,208,867	+		CCNA_03055	0.72	-1.3
3,208,884	+		CCNA_03055	0.75	-0.4
3,208,892	-		CCNA_03055	0.76	+0.9
3,208,932	+		CCNA_03055	0.82	-1.0
3,208,953	+		CCNA_03055	0.85	-0.5
3,208,988	-				-1.7
3,208,991	+				-0.1
3,209,015	+				-1.2
3,209,015	+				+0.9
3,209,023	-				-0.2
3,209,044	+				-1.4
3,209,049	+				+0.6
3,209,052	-				-0.4
3,209,069	-				+1.0
3,209,160	-				+4.7
3,209,177	+				+1.5
3,209,253	+		CCNA_03054	0.11	+1.0
3,209,261	-		CCNA_03054	0.12	-0.6
3,209,285	+		CCNA_03054	0.14	+0.7
3,209,285	+		CCNA_03054	0.14	+1.7
3,209,309	-		CCNA_03054	0.17	+0.5
3,209,310	+		CCNA_03054	0.17	+1.8
3,209,312	+		CCNA_03054	0.17	+1.2
3,209,312	+		CCNA_03054	0.17	+1.4
3,209,320	+		CCNA_03054	0.18	+2.1
3,209,320	+		CCNA_03054	0.18	+1.6
3,209,320	+		CCNA_03054	0.18	+1.4
3,209,320	+		CCNA_03054	0.18	+1.0
3,209,320	+		CCNA_03054	0.18	+1.0
3,209,320	+		CCNA_03054	0.18	+3.1
3,209,320	+		CCNA_03054	0.18	+1.8
3,209,320	+		CCNA_03054	0.18	+1.6
3,209,320	-		CCNA_03054	0.18	-0.5
3,209,328	-		CCNA_03054	0.19	+0.4
3,209,328	-		CCNA_03054	0.19	-0.6
3,209,332	+		CCNA_03054	0.19	+1.7
3,209,340	-		CCNA_03054	0.20	-0.3
3,209,472	+		CCNA_03054	0.34	+1.6
3,209,472	+		CCNA_03054	0.34	+1.1
3,209,472	+		CCNA_03054	0.34	+1.8
3,209,480	-		CCNA_03054	0.35	-0.2
3,209,480	-		CCNA_03054	0.35	-0.8
3,209,480	-		CCNA_03054	0.35	+0.9
3,209,480	-		CCNA_03054	0.35	+0.1
3,209,486	+		CCNA_03054	0.36	+1.2
3,209,495	+		CCNA_03054	0.37	+1.1
3,209,519	+		CCNA_03054	0.39	+2.2
3,209,532	+		CCNA_03054	0.41	+1.6
3,209,532	+		CCNA_03054	0.41	+1.5
3,209,540	-		CCNA_03054	0.42	-0.5
3,209,569	+		CCNA_03054	0.45	+1.7
3,209,577	-		CCNA_03054	0.45	-1.1
3,209,596	+		CCNA_03054	0.47	+3.0
3,209,596	+		CCNA_03054	0.47	+2.6
3,209,604	-		CCNA_03054	0.48	-0.6
3,209,606	+		CCNA_03054	0.49	+1.5
3,209,613	+		CCNA_03054	0.49	+1.3
3,209,613	+		CCNA_03054	0.49	+1.3
3,209,614	-		CCNA_03054	0.49	-2.3
3,209,642	-		CCNA_03054	0.52	+0.1
3,209,651	+		CCNA_03054	0.53	+0.6
3,209,651	+		CCNA_03054	0.53	+1.1
3,209,661	+		CCNA_03054	0.54	+0.7
3,209,686	-		CCNA_03054	0.57	+1.2
3,209,689	+		CCNA_03054	0.57	+2.0
3,209,696	+		CCNA_03054	0.58	+1.6
3,209,696	+		CCNA_03054	0.58	+0.4
3,209,719	-		CCNA_03054	0.61	-0.5
3,209,762	-		CCNA_03054	0.65	+0.6
3,209,786	+		CCNA_03054	0.68	+2.2
3,209,791	+		CCNA_03054	0.68	+1.5
3,209,799	-		CCNA_03054	0.69	-0.9
3,209,802	+		CCNA_03054	0.69	+1.1
3,209,806	+		CCNA_03054	0.70	+1.4
3,209,811	+		CCNA_03054	0.70	+1.4
3,209,811	+		CCNA_03054	0.70	+2.3
3,209,819	-		CCNA_03054	0.71	-0.2
3,209,819	-		CCNA_03054	0.71	-0.9
3,209,853	+		CCNA_03054	0.75	+1.6
3,209,932	+		CCNA_03054	0.83	+2.4
3,209,951	-		CCNA_03054	0.85	-1.0
3,209,961	-		CCNA_03054	0.86	-0.3
3,209,987	+		CCNA_03054	0.89	+3.2
3,209,995	-				+0.1
3,210,029	+				+2.0
3,210,029	+				+2.3
3,210,083	+				+2.9
3,210,107	+				+1.4
3,210,115	+				+0.1
3,210,163	+				+0.1
3,210,170	+				+0.8
3,210,175	+				-1.6
3,210,245	-				+1.9
3,210,245	-				+0.4
3,210,254	-				-0.8
3,210,254	-				-0.2
3,210,267	+				-1.2
3,210,267	+				-2.3
3,210,267	+				-2.4
3,210,275	-				+1.1
3,210,275	-				-1.5
3,210,275	-				+0.1
3,210,275	-				-1.0
3,210,275	-				+0.7
3,210,277	+				-2.6
3,210,285	-				+1.9
3,210,338	-		CCNA_03056	0.23	+1.5
3,210,382	+		CCNA_03056	0.34	+0.6
3,210,469	+				+0.9
3,210,496	+		CCNA_03056	0.63	-1.1
3,210,497	+		CCNA_03056	0.63	-1.3
3,210,504	-		CCNA_03056	0.65	-0.7
3,210,506	+		CCNA_03056	0.66	+2.2
3,210,563	-		CCNA_03056	0.80	+0.5
3,210,587	+		CCNA_03056	0.86	+0.3
3,210,595	-		CCNA_03056	0.88	+1.0
3,210,595	-		CCNA_03056	0.88	-0.5
3,210,606	-				-1.0
3,210,629	+				-1.1
3,210,647	+				-2.2
3,210,668	-				-1.1
3,210,753	+				-0.9
3,210,787	+		CCNA_03057	0.13	+0.2
3,210,800	-		CCNA_03057	0.17	+0.1
3,210,838	-		CCNA_03057	0.27	+1.3
3,210,838	-		CCNA_03057	0.27	-1.5
3,210,844	+		CCNA_03057	0.29	-2.2
3,210,857	+		CCNA_03057	0.33	-0.1
3,210,865	-		CCNA_03057	0.35	+0.6
3,210,872	+		CCNA_03057	0.37	+0.2
3,210,877	+		CCNA_03057	0.38	-0.7
3,210,915	+		CCNA_03057	0.48	-2.4
3,211,076	-				-0.6