Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02876

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,024,915	+		CCNA_02877	0.25	+0.3
3,024,924	-		CCNA_02877	0.25	-3.0
3,024,930	+		CCNA_02877	0.26	+0.2
3,024,945	-		CCNA_02877	0.27	-2.2
3,024,965	-		CCNA_02877	0.28	-2.0
3,025,023	+		CCNA_02877	0.33	+0.9
3,025,028	+		CCNA_02877	0.33	+1.1
3,025,028	+		CCNA_02877	0.33	+0.6
3,025,028	+		CCNA_02877	0.33	-0.9
3,025,028	+		CCNA_02877	0.33	+0.2
3,025,028	+		CCNA_02877	0.33	-0.8
3,025,028	+		CCNA_02877	0.33	-1.1
3,025,028	+		CCNA_02877	0.33	-1.6
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	+0.8
3,025,028	+				+1.8
3,025,028	+		CCNA_02877	0.33	+1.1
3,025,028	+		CCNA_02877	0.33	-2.8
3,025,028	+		CCNA_02877	0.33	-0.8
3,025,028	+		CCNA_02877	0.33	+2.1
3,025,028	+		CCNA_02877	0.33	-1.2
3,025,028	+		CCNA_02877	0.33	-2.5
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	+0.0
3,025,028	+		CCNA_02877	0.33	-1.0
3,025,028	+		CCNA_02877	0.33	+0.3
3,025,031	-		CCNA_02877	0.33	-2.6
3,025,036	-		CCNA_02877	0.34	-2.0
3,025,036	-		CCNA_02877	0.34	-1.4
3,025,036	-		CCNA_02877	0.34	+1.4
3,025,036	-		CCNA_02877	0.34	+1.4
3,025,036	-		CCNA_02877	0.34	-1.1
3,025,036	-		CCNA_02877	0.34	-0.3
3,025,036	-		CCNA_02877	0.34	-1.1
3,025,036	-		CCNA_02877	0.34	-0.9
3,025,082	+		CCNA_02877	0.37	-1.2
3,025,117	+		CCNA_02877	0.40	-1.8
3,025,132	+		CCNA_02877	0.41	-0.9
3,025,140	-		CCNA_02877	0.41	-0.9
3,025,231	+		CCNA_02877	0.48	-1.3
3,025,232	-		CCNA_02877	0.48	-0.2
3,025,232	-		CCNA_02877	0.48	+0.8
3,025,262	+		CCNA_02877	0.51	-0.1
3,025,267	+		CCNA_02877	0.51	+0.1
3,025,289	+		CCNA_02877	0.53	-0.2
3,025,293	+		CCNA_02877	0.53	+0.4
3,025,358	+		CCNA_02877	0.58	+1.1
3,025,358	+		CCNA_02877	0.58	+0.8
3,025,358	+		CCNA_02877	0.58	+1.4
3,025,358	+		CCNA_02877	0.58	-0.1
3,025,366	-				+2.1
3,025,376	+		CCNA_02877	0.59	+0.1
3,025,376	+		CCNA_02877	0.59	-0.7
3,025,389	-		CCNA_02877	0.60	-2.5
3,025,428	+		CCNA_02877	0.63	+0.1
3,025,463	+		CCNA_02877	0.66	+1.8
3,025,473	+		CCNA_02877	0.67	-1.2
3,025,473	+		CCNA_02877	0.67	-1.1
3,025,473	+		CCNA_02877	0.67	-0.3
3,025,473	+		CCNA_02877	0.67	-0.3
3,025,473	+		CCNA_02877	0.67	-0.8
3,025,473	+		CCNA_02877	0.67	+1.3
3,025,473	+		CCNA_02877	0.67	-0.7
3,025,473	+		CCNA_02877	0.67	-0.2
3,025,473	+		CCNA_02877	0.67	-1.3
3,025,473	+		CCNA_02877	0.67	-1.9
3,025,473	+		CCNA_02877	0.67	-1.3
3,025,473	+		CCNA_02877	0.67	-1.0
3,025,481	-		CCNA_02877	0.67	-1.1
3,025,481	-		CCNA_02877	0.67	-0.7
3,025,481	-		CCNA_02877	0.67	-1.3
3,025,481	-		CCNA_02877	0.67	-1.1
3,025,481	-		CCNA_02877	0.67	-1.7
3,025,481	-		CCNA_02877	0.67	-1.5
3,025,481	-		CCNA_02877	0.67	+2.4
3,025,481	-		CCNA_02877	0.67	-0.2
3,025,481	-		CCNA_02877	0.67	-0.4
3,025,481	-		CCNA_02877	0.67	-0.4
3,025,481	-		CCNA_02877	0.67	-1.3
3,025,481	-		CCNA_02877	0.67	-0.6
3,025,481	-		CCNA_02877	0.67	+1.1
3,025,481	-		CCNA_02877	0.67	-0.5
3,025,481	-		CCNA_02877	0.67	-1.0
3,025,486	-		CCNA_02877	0.67	+1.2
3,025,486	-		CCNA_02877	0.67	-0.5
3,025,486	-		CCNA_02877	0.67	-0.3
3,025,530	-		CCNA_02877	0.71	+0.4
3,025,578	+		CCNA_02877	0.74	-0.3
3,025,584	-		CCNA_02877	0.75	-2.1
3,025,596	-		CCNA_02877	0.76	-2.0
3,025,611	-		CCNA_02877	0.77	+0.1
3,025,623	-		CCNA_02877	0.78	-2.7
3,025,634	+		CCNA_02877	0.79	-1.2
3,025,634	+		CCNA_02877	0.79	-1.7
3,025,634	+		CCNA_02877	0.79	+0.4
3,025,642	-		CCNA_02877	0.79	+0.4
3,025,642	-		CCNA_02877	0.79	-0.9
3,025,642	-		CCNA_02877	0.79	+0.1
3,025,694	+		CCNA_02877	0.83	-0.6
3,025,694	+		CCNA_02877	0.83	-0.2
3,025,694	+		CCNA_02877	0.83	+0.2
3,025,702	+		CCNA_02877	0.84	+0.4
3,025,702	-		CCNA_02877	0.84	+1.1
3,025,703	+		CCNA_02877	0.84	-0.7
3,025,725	+		CCNA_02877	0.85	+1.3
3,025,725	+		CCNA_02877	0.85	+0.6
3,025,725	+		CCNA_02877	0.85	+1.4
3,025,733	-		CCNA_02877	0.86	-0.6
3,025,735	+		CCNA_02877	0.86	+0.2
3,025,793	+				-1.5
3,025,896	+				-0.9
3,025,910	-				+0.8
3,025,960	+		CCNA_02876	0.16	+1.1
3,025,968	-		CCNA_02876	0.18	-1.2
3,025,968	-		CCNA_02876	0.18	+0.2
3,025,968	-		CCNA_02876	0.18	+0.8
3,025,978	-		CCNA_02876	0.20	-0.6
3,025,985	+		CCNA_02876	0.22	-0.1
3,025,985	+		CCNA_02876	0.22	+0.1
3,025,985	+		CCNA_02876	0.22	-0.6
3,025,995	+		CCNA_02876	0.24	-1.1
3,026,002	+		CCNA_02876	0.26	+0.4
3,026,003	-		CCNA_02876	0.26	-2.3
3,026,036	-		CCNA_02876	0.33	-0.8
3,026,082	+		CCNA_02876	0.44	-0.5
3,026,143	+		CCNA_02876	0.58	+0.9
3,026,151	-		CCNA_02876	0.59	-0.2
3,026,152	+		CCNA_02876	0.60	+1.2
3,026,191	-		CCNA_02876	0.68	-1.3
3,026,191	-		CCNA_02876	0.68	-0.1
3,026,191	-		CCNA_02876	0.68	-0.8
3,026,218	-		CCNA_02876	0.75	-1.2
3,026,241	+		CCNA_02876	0.80	-0.3
3,026,286	-				-2.1
3,026,286	-				+0.8
3,026,288	+				+1.9
3,026,291	-				-0.6
3,026,296	-				+2.4
3,026,296	-				-1.7
3,026,296	-				-1.4
3,026,376	-				+2.8
3,026,376	-				+0.3
3,026,380	-				-0.1
3,026,394	+				+0.4
3,026,417	+				-1.6
3,026,417	+				-0.0
3,026,453	-				-0.5
3,026,473	-				+2.0
3,026,473	-				+2.6
3,026,563	-				+0.5
3,026,594	-		CCNA_02878	0.23	-0.3
3,026,596	-		CCNA_02878	0.25	-0.0
3,026,721	+				+0.1
3,026,731	+				-0.9
3,026,748	+				-0.1
3,026,788	-				+0.0
3,026,827	-		CCNA_02879	0.39	+0.3
3,026,890	-				+0.9
3,026,890	-				-0.1
3,026,908	-				+1.8
3,026,998	+				-1.7
3,027,013	+				-1.1
3,027,022	-				+0.4
3,027,031	-				+0.8
3,027,031	-				-0.8
3,027,054	+				+0.2
3,027,062	-				-1.1
3,027,071	+				-1.3
3,027,071	+				-0.1
3,027,071	+				+1.3
3,027,071	+				-0.2
3,027,071	+				-1.1
3,027,079	-				-0.4
3,027,079	-				-0.8
3,027,079	-				+0.7
3,027,079	-				+0.4
3,027,079	-				+0.9
3,027,079	-				+1.0
3,027,079	-				+0.6
3,027,079	-				-0.4
3,027,079	-				+1.9
3,027,079	-				+2.6
3,027,111	-				+2.0
3,027,128	+				+0.0
3,027,136	-				-2.6
3,027,166	+				-2.0
3,027,166	+				-0.9
3,027,166	+				-0.7
3,027,171	+				-1.9
3,027,173	+				-0.1
3,027,174	-				-0.0
3,027,174	-				-0.8
3,027,174	-				+0.1
3,027,174	-				+1.6
3,027,174	-				-1.7
3,027,195	-		CCNA_02880	0.11	+0.4
3,027,217	-		CCNA_02880	0.12	-0.5
3,027,251	-		CCNA_02880	0.14	-0.5
3,027,271	+		CCNA_02880	0.15	+0.5
3,027,274	-		CCNA_02880	0.15	-1.0
3,027,274	-		CCNA_02880	0.15	+0.9
3,027,274	-		CCNA_02880	0.15	+1.1
3,027,279	-		CCNA_02880	0.15	-0.6
3,027,279	-		CCNA_02880	0.15	-0.4
3,027,279	-		CCNA_02880	0.15	-1.4
3,027,284	-		CCNA_02880	0.16	+0.6