Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00996

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,077,836	-		CCNA_00995	0.44	-0.6
1,077,852	+		CCNA_00995	0.46	-1.3
1,077,874	+		CCNA_00995	0.47	-0.6
1,077,889	-		CCNA_00995	0.48	-1.9
1,077,896	+		CCNA_00995	0.49	-1.3
1,077,923	+		CCNA_00995	0.51	-2.1
1,077,958	+		CCNA_00995	0.54	+1.7
1,077,968	+		CCNA_00995	0.54	-0.4
1,077,968	+		CCNA_00995	0.54	-2.0
1,077,973	+		CCNA_00995	0.55	-1.2
1,077,976	-		CCNA_00995	0.55	-1.3
1,077,978	+		CCNA_00995	0.55	-1.2
1,077,988	-		CCNA_00995	0.56	-1.3
1,078,011	-		CCNA_00995	0.58	-2.6
1,078,036	-		CCNA_00995	0.59	-1.7
1,078,038	+		CCNA_00995	0.60	-2.8
1,078,046	-		CCNA_00995	0.60	-1.5
1,078,068	+		CCNA_00995	0.62	-2.3
1,078,068	+		CCNA_00995	0.62	+0.0
1,078,155	+		CCNA_00995	0.68	-1.8
1,078,195	-		CCNA_00995	0.71	-0.7
1,078,290	-		CCNA_00995	0.79	-1.0
1,078,353	+		CCNA_00995	0.83	+0.3
1,078,353	-		CCNA_00995	0.83	-2.3
1,078,362	+		CCNA_00995	0.84	-1.0
1,078,370	-		CCNA_00995	0.84	+0.1
1,078,386	-		CCNA_00995	0.86	+1.7
1,078,393	+		CCNA_00995	0.86	+0.1
1,078,394	+		CCNA_00995	0.86	-0.5
1,078,407	+		CCNA_00995	0.87	+0.5
1,078,409	-		CCNA_00995	0.87	-0.0
1,078,413	-		CCNA_00995	0.88	-0.2
1,078,447	+				+0.1
1,078,447	+				+0.1
1,078,455	-				-2.3
1,078,455	-				-1.8
1,078,475	+				-1.0
1,078,493	+				+1.0
1,078,528	+				-0.1
1,078,570	+				+1.1
1,078,572	+				+0.5
1,078,572	+				+0.1
1,078,572	+				+0.7
1,078,578	-				+1.8
1,078,580	-				-1.8
1,078,603	-				-2.0
1,078,603	-				-1.5
1,078,617	+				+0.4
1,078,625	-				+1.1
1,078,640	-				+0.4
1,078,652	+				+1.2
1,078,652	+				-0.4
1,078,652	+				-2.0
1,078,660	-				+0.9
1,078,660	-				-0.3
1,078,660	-				+0.2
1,078,660	-				-1.4
1,078,660	-				-0.4
1,078,660	-				+0.6
1,078,660	-				+0.4
1,078,663	+				-2.4
1,078,663	+				-1.6
1,078,663	+				-0.0
1,078,663	+				-2.0
1,078,671	-				-0.2
1,078,671	-				-0.2
1,078,671	-				-0.4
1,078,671	-				+0.3
1,078,671	-				-0.0
1,078,671	-				+0.6
1,078,671	-				+0.1
1,078,675	-				-2.2
1,078,676	-				-0.5
1,078,805	-				+0.8
1,078,813	+				-0.6
1,078,819	+				-2.0
1,078,823	+				-1.3
1,078,829	-				+1.5
1,078,836	-				-0.2
1,078,841	-				-0.3
1,078,841	-				+0.4
1,078,841	-				+1.5
1,078,844	-				-0.9
1,078,872	+				-0.1
1,078,880	-				-1.2
1,078,911	-		CCNA_00996	0.12	+1.8
1,078,920	+		CCNA_00996	0.13	+0.8
1,078,930	-		CCNA_00996	0.14	-2.6
1,078,957	+		CCNA_00996	0.17	+0.5
1,078,965	+		CCNA_00996	0.18	-1.1
1,078,979	-		CCNA_00996	0.19	-0.7
1,079,003	-		CCNA_00996	0.22	-1.0
1,079,013	-		CCNA_00996	0.23	-1.3
1,079,032	+		CCNA_00996	0.25	-1.9
1,079,064	-		CCNA_00996	0.29	-0.7
1,079,071	-		CCNA_00996	0.30	+1.4
1,079,073	+		CCNA_00996	0.30	+0.2
1,079,073	+		CCNA_00996	0.30	-2.8
1,079,087	-		CCNA_00996	0.32	-1.6
1,079,111	+		CCNA_00996	0.34	+0.8
1,079,119	-		CCNA_00996	0.35	-0.8
1,079,143	-		CCNA_00996	0.38	-0.2
1,079,143	-		CCNA_00996	0.38	-0.6
1,079,177	+		CCNA_00996	0.42	+0.5
1,079,182	+		CCNA_00996	0.42	-0.7
1,079,182	+		CCNA_00996	0.42	+0.5
1,079,183	-		CCNA_00996	0.42	-1.3
1,079,185	-		CCNA_00996	0.43	-3.2
1,079,196	-		CCNA_00996	0.44	-1.9
1,079,226	-		CCNA_00996	0.47	+0.1
1,079,245	+		CCNA_00996	0.49	-0.4
1,079,253	-		CCNA_00996	0.50	-2.7
1,079,288	+		CCNA_00996	0.54	-2.9
1,079,299	+		CCNA_00996	0.56	+1.0
1,079,320	+		CCNA_00996	0.58	+1.8
1,079,320	+		CCNA_00996	0.58	-1.9
1,079,328	-		CCNA_00996	0.59	-2.4
1,079,331	+		CCNA_00996	0.59	-2.9
1,079,331	+		CCNA_00996	0.59	-1.0
1,079,331	+		CCNA_00996	0.59	-1.0
1,079,331	+		CCNA_00996	0.59	-1.6
1,079,331	+		CCNA_00996	0.59	-2.0
1,079,339	-		CCNA_00996	0.60	-2.0
1,079,339	-		CCNA_00996	0.60	+0.1
1,079,339	-				+1.8
1,079,339	-		CCNA_00996	0.60	+0.8
1,079,339	-		CCNA_00996	0.60	+0.2
1,079,349	+		CCNA_00996	0.61	+0.4
1,079,378	-		CCNA_00996	0.65	-1.7
1,079,382	+		CCNA_00996	0.65	-0.2
1,079,428	+		CCNA_00996	0.70	-1.7
1,079,428	+		CCNA_00996	0.70	-2.0
1,079,496	-		CCNA_00996	0.78	-2.2
1,079,588	-		CCNA_00996	0.88	+1.2
1,079,634	+				-1.5
1,079,665	+				+0.6
1,079,725	+				+0.5
1,079,730	+				-0.5
1,079,730	+				-1.6
1,079,730	+				+0.1
1,079,738	-				-0.7
1,079,752	+				-0.9
1,079,760	-				-0.5
1,079,764	+				+0.5
1,079,764	+				-1.9
1,079,772	-				-0.5
1,079,772	-				-1.8
1,079,772	-				-0.9
1,079,772	-				-1.4
1,079,787	+				-1.7
1,079,797	-				-1.6
1,079,807	-				-0.4
1,079,880	-				-0.0
1,079,895	+				+0.6
1,079,903	-				+1.3
1,079,905	+				+0.4
1,079,905	+				+0.6
1,079,927	+				+1.1
1,079,930	-				+0.1
1,079,935	-				+0.2
1,079,935	-				-2.9
1,079,935	-				-0.6
1,079,948	-				-2.8
1,079,959	+				+1.0
1,079,959	+				+0.1
1,079,959	+				+0.2
1,079,967	-				-1.9
1,079,992	+				+0.4
1,079,999	+				+1.8
1,080,000	-				-1.6
1,080,000	-				-1.6
1,080,017	+				+0.0
1,080,025	-				-0.2
1,080,107	+		CCNA_00997	0.16	+0.6
1,080,107	+		CCNA_00997	0.16	-0.2
1,080,112	+		CCNA_00997	0.16	-0.8
1,080,120	+		CCNA_00997	0.17	-0.2
1,080,125	+		CCNA_00997	0.17	+1.9
1,080,130	+		CCNA_00997	0.18	+0.5
1,080,141	+		CCNA_00997	0.18	-0.9
1,080,155	+		CCNA_00997	0.20	-1.1
1,080,211	-		CCNA_00997	0.24	-2.2
1,080,211	-		CCNA_00997	0.24	+0.2
1,080,236	+		CCNA_00997	0.26	+2.8
1,080,236	+		CCNA_00997	0.26	-1.6
1,080,236	+		CCNA_00997	0.26	+0.2
1,080,241	+		CCNA_00997	0.27	-1.1
1,080,244	-		CCNA_00997	0.27	-1.2
1,080,249	+		CCNA_00997	0.27	-0.5
1,080,259	+		CCNA_00997	0.28	-0.5
1,080,259	+		CCNA_00997	0.28	-0.8
1,080,259	+		CCNA_00997	0.28	-0.4
1,080,267	-		CCNA_00997	0.29	-2.2
1,080,267	-		CCNA_00997	0.29	-0.5
1,080,267	-		CCNA_00997	0.29	-1.7
1,080,269	+		CCNA_00997	0.29	-0.9
1,080,274	-		CCNA_00997	0.29	+0.0
1,080,309	-		CCNA_00997	0.32	+0.2
1,080,326	-		CCNA_00997	0.34	-2.6
1,080,328	+		CCNA_00997	0.34	-1.3
1,080,362	+		CCNA_00997	0.37	+0.2
1,080,370	-		CCNA_00997	0.37	-1.2
1,080,379	+		CCNA_00997	0.38	-0.8
1,080,379	+		CCNA_00997	0.38	+0.8
1,080,431	+		CCNA_00997	0.42	+1.7
1,080,432	+		CCNA_00997	0.42	+0.2
1,080,437	-		CCNA_00997	0.43	-1.2
1,080,467	+		CCNA_00997	0.45	-0.4
1,080,479	+		CCNA_00997	0.46	+1.2
1,080,496	+		CCNA_00997	0.47	-2.8
1,080,496	+		CCNA_00997	0.47	-0.6
1,080,518	-		CCNA_00997	0.49	+0.9
1,080,543	+		CCNA_00997	0.51	+0.8
1,080,548	-		CCNA_00997	0.52	-0.2
1,080,548	-		CCNA_00997	0.52	+0.9
1,080,585	+		CCNA_00997	0.55	-0.4
1,080,585	+		CCNA_00997	0.55	+0.5
1,080,590	+		CCNA_00997	0.55	-0.2
1,080,595	+		CCNA_00997	0.56	+1.9
1,080,595	+		CCNA_00997	0.56	+1.3
1,080,603	-		CCNA_00997	0.56	-2.1
1,080,635	+		CCNA_00997	0.59	+0.4
1,080,635	+		CCNA_00997	0.59	-0.8
1,080,635	+		CCNA_00997	0.59	+0.7
1,080,643	-		CCNA_00997	0.59	+0.8
1,080,669	-		CCNA_00997	0.62	+0.2