Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34730

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,235,765	+		RR42_RS34725	0.61	+1.2
3,235,765	+		RR42_RS34725	0.61	+1.5
3,235,765	+		RR42_RS34725	0.61	+2.0
3,235,765	+		RR42_RS34725	0.61	-0.2
3,235,765	+		RR42_RS34725	0.61	+0.7
3,235,766	-		RR42_RS34725	0.61	+0.4
3,235,870	-		RR42_RS34725	0.78	-0.4
3,235,907	+		RR42_RS34725	0.84	-0.3
3,235,908	-		RR42_RS34725	0.84	+0.5
3,235,941	+		RR42_RS34725	0.90	+0.2
3,235,941	+		RR42_RS34725	0.90	-0.1
3,235,942	-				+0.1
3,235,942	-				+0.1
3,235,973	+				+0.1
3,235,973	+				-0.2
3,235,978	-				-0.3
3,235,994	+				-0.0
3,236,007	+				-0.2
3,236,007	+				+0.6
3,236,008	-				-1.0
3,236,075	+				-0.0
3,236,076	-				+0.3
3,236,076	-				-1.9
3,236,138	+				-0.0
3,236,138	+				+0.0
3,236,171	-				-0.8
3,236,322	+				+0.7
3,236,323	-				+0.3
3,236,353	+				+0.2
3,237,032	-		RR42_RS34730	0.36	-0.6
3,237,513	+		RR42_RS34730	0.65	+0.1
3,237,513	+		RR42_RS34730	0.65	-0.2
3,237,513	+		RR42_RS34730	0.65	+0.4
3,237,514	-		RR42_RS34730	0.65	-0.1
3,237,514	-		RR42_RS34730	0.65	-0.3
3,237,538	+		RR42_RS34730	0.67	-0.1
3,237,571	-		RR42_RS34730	0.69	+0.3
3,237,693	+		RR42_RS34730	0.76	-1.0
3,237,863	+		RR42_RS34730	0.87	-0.3
3,237,864	-		RR42_RS34730	0.87	+0.2
3,237,864	-		RR42_RS34730	0.87	-0.4
3,238,026	-				+0.2
3,238,119	+				-2.1
3,238,180	+				-1.7
3,238,180	+				-0.2
3,238,280	+				-1.1
3,238,280	+				+0.7
3,238,280	+				+0.2
3,238,281	-				-1.7
3,238,319	-				-0.5
3,238,328	-				+0.7
3,238,577	+				-0.1
3,238,614	-				-0.0
3,238,782	-		RR42_RS34735	0.19	-0.3
3,239,010	+		RR42_RS34735	0.34	+0.3
3,239,011	-		RR42_RS34735	0.34	-0.5
3,239,067	+		RR42_RS34735	0.37	-0.0
3,239,067	+		RR42_RS34735	0.37	+0.8