Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34450

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,156,822	-		RR42_RS34445	0.25	+0.4
3,157,148	+		RR42_RS34445	0.55	-0.2
3,157,149	-		RR42_RS34445	0.55	+1.0
3,157,274	+		RR42_RS34445	0.67	+1.3
3,157,274	+		RR42_RS34445	0.67	+0.2
3,157,275	-		RR42_RS34445	0.67	+2.1
3,157,293	-		RR42_RS34445	0.69	+0.4
3,157,407	-		RR42_RS34445	0.79	+0.1
3,157,407	-		RR42_RS34445	0.79	+0.3
3,157,407	-		RR42_RS34445	0.79	-0.3
3,157,798	+				+2.0
3,157,816	+				+1.9
3,157,839	+				-0.2
3,157,839	+				+0.0
3,158,425	+		RR42_RS34450	0.47	-0.1
3,158,425	+		RR42_RS34450	0.47	-1.5
3,158,425	+		RR42_RS34450	0.47	-1.0
3,158,426	-		RR42_RS34450	0.47	-0.0
3,158,470	+		RR42_RS34450	0.50	+0.3
3,158,471	-		RR42_RS34450	0.50	-0.0
3,158,699	-		RR42_RS34450	0.68	-0.6
3,159,061	+				+0.1
3,159,061	+				+0.5
3,159,061	+				+0.2
3,159,062	-				+1.7
3,159,091	+				-0.5
3,159,091	+				+0.2
3,159,091	+				-1.1
3,159,517	+		RR42_RS34455	0.16	+0.6
3,159,684	+		RR42_RS34455	0.30	+0.0
3,159,684	+		RR42_RS34455	0.30	+0.5
3,159,684	+		RR42_RS34455	0.30	-0.2
3,159,684	+		RR42_RS34455	0.30	-0.9
3,159,892	-		RR42_RS34455	0.48	-0.9
3,159,958	-		RR42_RS34455	0.53	-1.2
3,160,030	-		RR42_RS34455	0.60	+0.2
3,160,059	+		RR42_RS34455	0.62	+0.5