Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34215

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,099,792	-		RR42_RS34205	0.75	-1.7
3,099,806	+		RR42_RS34205	0.79	-0.1
3,099,807	-		RR42_RS34205	0.79	+0.1
3,099,807	-		RR42_RS34205	0.79	+0.1
3,099,939	+				+0.5
3,100,270	+		RR42_RS34210	0.43	-0.3
3,100,271	-		RR42_RS34210	0.44	+0.2
3,100,271	-		RR42_RS34210	0.44	-2.9
3,100,496	+				-0.5
3,100,537	-				-0.6
3,100,582	+				+0.2
3,100,614	-				+0.7
3,100,730	-				+0.4
3,100,731	+				-2.4
3,100,731	+				+0.6
3,100,731	+				+0.4
3,100,893	+		RR42_RS34215	0.45	-1.0
3,101,308	+				+0.1
3,101,309	-				-0.5
3,101,547	-				+1.8
3,101,547	-				+0.7
3,101,852	+		RR42_RS34220	0.19	-0.3
3,101,853	-		RR42_RS34220	0.19	-0.2
3,101,906	+		RR42_RS34220	0.21	-0.0
3,101,907	-		RR42_RS34220	0.21	-1.5
3,101,907	-		RR42_RS34220	0.21	+0.1
3,101,930	+		RR42_RS34220	0.22	+1.1
3,101,931	-		RR42_RS34220	0.22	+0.4
3,101,931	-		RR42_RS34220	0.22	-0.2
3,101,933	+		RR42_RS34220	0.22	+0.5
3,101,933	+		RR42_RS34220	0.22	+0.4