Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34150

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,087,703	+				-0.5
3,087,776	-				+0.7
3,087,776	-				-0.7
3,087,835	-				+0.8
3,087,908	+				-0.6
3,087,961	-		RR42_RS34145	0.13	-0.5
3,088,182	+		RR42_RS34145	0.57	-2.1
3,088,187	+		RR42_RS34145	0.58	-1.9
3,088,187	+		RR42_RS34145	0.58	-0.5
3,088,187	+		RR42_RS34145	0.58	-1.7
3,088,188	-		RR42_RS34145	0.58	-0.3
3,088,341	-		RR42_RS34145	0.88	-0.3
3,088,370	-				+0.9
3,088,385	+				-2.6
3,088,385	+				-0.3
3,088,385	+				+0.4
3,088,385	+				+0.5
3,088,386	-				-0.9
3,088,398	-				+1.3
3,088,538	+				+0.1
3,088,538	+				-0.7
3,088,538	+				-0.4
3,088,538	+				-0.6
3,088,538	+				+0.6
3,088,538	+				-0.7
3,088,538	+				+0.2
3,088,538	+				-1.3
3,088,538	+				+0.6
3,088,539	-				-1.3
3,088,610	+				-0.2
3,088,610	+				-2.3
3,088,611	-				+0.6
3,088,611	-				-0.7
3,088,674	+				-0.3
3,088,819	+		RR42_RS34150	0.39	+0.6
3,088,819	+		RR42_RS34150	0.39	+1.3
3,088,820	-		RR42_RS34150	0.40	-0.8
3,088,847	-		RR42_RS34150	0.45	-0.6
3,088,928	+		RR42_RS34150	0.63	+1.3
3,088,929	-		RR42_RS34150	0.63	-0.5
3,089,102	+				-1.3
3,089,102	+				+0.7
3,089,102	+				-0.6
3,089,102	+				-1.0
3,089,102	+				+0.1
3,089,103	-				-1.0
3,089,103	-				-0.0
3,089,103	-				+0.3
3,089,106	+				-1.4
3,089,107	-				-0.1
3,089,107	-				-1.4
3,089,107	-				-0.4
3,089,107	-				+0.1
3,089,163	+				-0.0
3,089,335	-				+1.3
3,089,475	+				+0.5
3,089,497	-				+0.1
3,089,531	+				-1.0
3,089,531	+				+0.8
3,089,531	+				-0.0
3,089,555	+				+0.6
3,089,624	+				+1.0
3,089,625	-				-1.0
3,089,625	-				-1.4
3,089,625	-				+0.2
3,089,625	-				+0.2
3,089,625	-				+0.4
3,089,625	-				-0.0
3,089,628	+				+0.1
3,089,629	-				-0.6
3,089,629	-				+0.9
3,089,629	-				+0.4
3,089,631	+				-0.6
3,089,631	+				+0.3
3,089,632	-				-0.2
3,089,734	+		RR42_RS34155	0.40	+0.5
3,089,735	-		RR42_RS34155	0.40	+0.5
3,089,741	+		RR42_RS34155	0.43	+0.6
3,089,741	+		RR42_RS34155	0.43	-0.9
3,089,884	+				+0.5
3,089,884	+				-0.3
3,089,884	+				+1.3
3,089,884	+				-0.5
3,089,884	+				-0.7
3,089,885	-				-0.0
3,090,026	-		RR42_RS34160	0.19	+1.1
3,090,026	-		RR42_RS34160	0.19	+0.1