Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34140

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,086,130	-				+1.0
3,086,130	-				+0.1
3,086,266	+				+0.0
3,086,266	+				-0.8
3,086,266	+				-0.1
3,086,390	-		RR42_RS34135	0.24	+0.6
3,086,440	+		RR42_RS34135	0.37	-1.3
3,086,443	-		RR42_RS34135	0.38	+1.3
3,086,446	+		RR42_RS34135	0.38	-0.2
3,086,446	+		RR42_RS34135	0.38	-0.1
3,086,482	+		RR42_RS34135	0.48	-0.9
3,086,482	+		RR42_RS34135	0.48	-0.5
3,086,483	-		RR42_RS34135	0.48	+1.2
3,086,483	-		RR42_RS34135	0.48	-0.3
3,086,483	-		RR42_RS34135	0.48	+0.5
3,086,483	-		RR42_RS34135	0.48	-0.3
3,086,483	-		RR42_RS34135	0.48	-0.2
3,086,501	+		RR42_RS34135	0.53	-0.4
3,086,501	+		RR42_RS34135	0.53	-0.5
3,086,618	-		RR42_RS34135	0.84	+0.7
3,086,667	+				-0.5
3,086,668	-				-0.7
3,086,669	+				-0.9
3,086,669	+				+0.1
3,086,670	-				-1.0
3,086,670	-				+0.1
3,086,757	+				+0.7
3,086,758	-				-0.8
3,086,758	-				-0.5
3,086,773	+				-0.3
3,086,773	+				-0.4
3,086,773	+				+0.2
3,086,774	-				-1.4
3,086,774	-				+0.5
3,086,774	-				+0.9
3,086,774	-				-1.3
3,086,775	+				-0.8
3,086,775	+				-0.9
3,086,775	+				+0.5
3,086,776	-				-1.3
3,086,776	-				-1.1
3,086,776	-				-0.5
3,086,776	-				+1.3
3,086,776	-				-0.0
3,086,779	+				+0.4
3,086,780	-				+0.6
3,086,862	+				-0.7
3,086,869	-				-0.4
3,086,894	+				-0.9
3,086,895	-				-1.1
3,086,895	-				+0.7
3,086,899	+				-1.0
3,086,930	+				-0.5
3,086,941	+				+0.3
3,087,052	+		RR42_RS34140	0.14	-0.5
3,087,095	+		RR42_RS34140	0.34	+1.0
3,087,096	-		RR42_RS34140	0.35	+1.4
3,087,106	+		RR42_RS34140	0.39	-0.3
3,087,106	+		RR42_RS34140	0.39	-0.1
3,087,107	-		RR42_RS34140	0.40	+0.9
3,087,127	+		RR42_RS34140	0.49	+1.5
3,087,128	-		RR42_RS34140	0.50	+0.5
3,087,284	-				+0.4
3,087,312	-				-0.4
3,087,312	-				-0.5
3,087,355	+				-0.3
3,087,355	+				+0.3
3,087,356	-				-2.3
3,087,359	+				-0.2
3,087,359	+				-0.7
3,087,375	+				+0.4
3,087,376	-				-0.8
3,087,376	-				+0.1
3,087,376	-				+1.3
3,087,376	-				+0.3
3,087,528	+				-0.2
3,087,528	+				-1.0
3,087,529	-				-0.9
3,087,529	-				+2.3
3,087,703	+				-0.5
3,087,776	-				+0.7
3,087,776	-				-0.7
3,087,835	-				+0.8
3,087,908	+				-0.6
3,087,961	-		RR42_RS34145	0.13	-0.5
3,088,182	+		RR42_RS34145	0.57	-2.1
3,088,187	+		RR42_RS34145	0.58	-1.9
3,088,187	+		RR42_RS34145	0.58	-0.5
3,088,187	+		RR42_RS34145	0.58	-1.7
3,088,188	-		RR42_RS34145	0.58	-0.3