Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33805

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,013,092	+				-1.0
3,013,154	+				-0.6
3,013,202	+		RR42_RS33800	0.10	+0.7
3,013,202	+		RR42_RS33800	0.10	+0.3
3,013,337	+		RR42_RS33800	0.30	-0.4
3,013,337	+		RR42_RS33800	0.30	-1.5
3,013,337	+		RR42_RS33800	0.30	+0.1
3,013,338	-		RR42_RS33800	0.30	-1.2
3,013,338	-		RR42_RS33800	0.30	-0.3
3,013,338	-		RR42_RS33800	0.30	+0.3
3,013,338	-		RR42_RS33800	0.30	-1.6
3,013,469	+		RR42_RS33800	0.50	-1.5
3,013,470	-		RR42_RS33800	0.50	-0.0
3,013,470	-		RR42_RS33800	0.50	-0.3
3,013,470	-		RR42_RS33800	0.50	+0.7
3,013,491	-		RR42_RS33800	0.53	-0.3
3,014,200	-		RR42_RS33805	0.17	-1.6
3,014,200	-		RR42_RS33805	0.17	-0.4
3,014,370	+		RR42_RS33805	0.28	-1.7
3,014,388	+		RR42_RS33805	0.29	-1.7
3,014,607	+		RR42_RS33805	0.44	-0.7
3,014,769	+		RR42_RS33805	0.54	+0.1
3,014,790	+		RR42_RS33805	0.56	-0.4
3,014,791	-		RR42_RS33805	0.56	+0.7
3,014,961	+		RR42_RS33805	0.67	-2.0
3,014,961	+		RR42_RS33805	0.67	-0.0
3,014,961	+		RR42_RS33805	0.67	-1.1
3,014,962	-		RR42_RS33805	0.67	-0.0
3,014,962	-		RR42_RS33805	0.67	-0.7
3,014,962	-		RR42_RS33805	0.67	+0.4
3,015,379	-				-0.5
3,015,546	+				+0.4
3,015,571	+				+0.5
3,015,572	-				-0.3
3,015,572	-				-1.3
3,015,579	+		RR42_RS33810	0.11	-0.6
3,015,580	-		RR42_RS33810	0.11	+0.6
3,015,580	-		RR42_RS33810	0.11	-0.7
3,015,658	-		RR42_RS33810	0.37	-2.8
3,015,658	-		RR42_RS33810	0.37	+0.5
3,015,666	+		RR42_RS33810	0.40	+0.2
3,015,735	+		RR42_RS33810	0.62	-1.9
3,015,736	-		RR42_RS33810	0.62	+0.8
3,015,736	-		RR42_RS33810	0.62	-0.4
3,015,736	-		RR42_RS33810	0.62	+0.9
3,015,736	-		RR42_RS33810	0.62	-1.3
3,015,826	+				+0.3
3,015,828	+				-0.8
3,015,828	+				+0.8
3,015,829	-				+0.4
3,015,829	-				+1.3
3,015,829	-				+0.1
3,015,829	-				+0.5
3,015,837	+				-2.4
3,016,193	+		RR42_RS33815	0.52	+0.1
3,016,431	+				+0.2
3,016,432	-				+0.2
3,016,432	-				+0.4
3,016,432	-				-0.2
3,016,432	-				-1.3
3,016,432	-				+0.9
3,016,432	-				-0.1