Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33640

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,972,932	+		RR42_RS33635	0.85	+0.2
2,972,932	+		RR42_RS33635	0.85	-0.3
2,972,932	+		RR42_RS33635	0.85	+0.2
2,972,932	+		RR42_RS33635	0.85	-0.6
2,972,933	-		RR42_RS33635	0.85	-0.1
2,972,933	-		RR42_RS33635	0.85	+0.5
2,972,946	+		RR42_RS33635	0.87	-0.2
2,972,947	-		RR42_RS33635	0.87	-0.2
2,972,947	-		RR42_RS33635	0.87	+0.3
2,972,947	-		RR42_RS33635	0.87	-0.7
2,972,988	+				-1.2
2,972,988	+				+0.1
2,972,989	-				+0.2
2,973,009	-				-0.2
2,973,009	-				-0.3
2,973,234	-				-1.0
2,973,283	-				-1.2
2,973,288	+				-0.7
2,973,339	+				+0.6
2,973,340	-				-0.4
2,973,352	-				-0.9
2,973,352	-				-1.3
2,973,352	-				+0.4
2,973,401	+				-0.2
2,973,401	+				+0.4
2,973,402	-				+0.3
2,973,452	+				-0.0
2,973,474	-				+1.0
2,973,509	+				+0.4
2,973,527	+				-0.3
2,973,528	-				+1.4
2,973,604	+				+1.8
2,973,649	-				-0.1
2,973,791	+				+0.8
2,973,792	-				-0.2
2,973,792	-				+0.8
2,973,792	-				-1.0
2,973,792	-				+0.0
2,973,792	-				-1.6
2,973,793	+				+0.3
2,973,896	+				+1.3
2,973,979	+				-0.2
2,973,979	+				+0.7
2,973,979	+				-0.1
2,973,980	-				-0.6
2,973,980	-				-0.1
2,974,159	+		RR42_RS33640	0.19	+2.3
2,974,519	+		RR42_RS33640	0.45	+0.1
2,974,520	-		RR42_RS33640	0.45	-0.6
2,974,520	-		RR42_RS33640	0.45	+0.3
2,974,606	+		RR42_RS33640	0.52	-1.2
2,974,607	-		RR42_RS33640	0.52	-0.7
2,974,607	-		RR42_RS33640	0.52	+0.4
2,974,792	+		RR42_RS33640	0.66	-0.6
2,974,984	+		RR42_RS33640	0.80	-1.2
2,974,985	-		RR42_RS33640	0.80	-0.7
2,974,985	-		RR42_RS33640	0.80	+0.4
2,974,985	-		RR42_RS33640	0.80	-0.1
2,975,122	+				+0.3
2,975,307	+				-0.4
2,975,308	-				-0.9
2,975,390	+				+0.5
2,975,390	+				+0.5
2,975,390	+				+7.1
2,975,390	+				+0.7
2,975,390	+				+0.1
2,975,391	-				-1.8
2,975,391	-				+1.6
2,975,391	-				-2.0
2,975,391	-				+2.0
2,975,391	-				-0.3
2,975,391	-				+0.1
2,975,391	-				-0.0
2,975,391	-				+0.7
2,975,420	+				-0.9
2,975,420	+				+0.6
2,975,420	+				+0.7
2,975,420	+				-0.7
2,975,420	+				+0.2
2,975,420	+				+1.8
2,975,420	+				+0.6
2,975,420	+				-1.2
2,975,420	+				-0.2
2,975,421	-				+3.5
2,975,444	+				+0.3
2,975,444	+				+1.0
2,975,445	-				+0.5
2,975,463	+				-0.2
2,975,464	-				-1.7
2,975,502	+				-1.0
2,975,515	+				+0.2
2,975,515	+				+0.6
2,975,515	+				-0.5
2,975,515	+				+0.1
2,975,515	+				-0.6
2,975,515	+				-0.3
2,975,515	+				+0.8
2,975,515	+				+0.7
2,975,515	+				-0.6
2,975,515	+				-0.5
2,975,515	+				-0.9
2,975,516	-				+0.7
2,975,516	-				-0.3
2,975,516	-				+2.9
2,975,516	-				-1.7
2,975,516	-				-0.1
2,975,516	-				-2.5
2,975,516	-				+0.2
2,975,517	+				-0.6
2,975,517	+				-1.5
2,975,517	+				-0.6
2,975,517	+				+3.5
2,975,517	+				+0.2
2,975,518	-				+1.3
2,975,518	-				+0.0
2,975,518	-				+1.5
2,975,601	+				-1.1
2,975,601	+				-0.9
2,975,601	+				-0.1
2,975,602	-				-0.5
2,975,602	-				+1.3
2,975,602	-				-0.2
2,975,602	-				-0.1
2,975,689	+				-2.5
2,975,690	-				+0.4
2,975,734	+		RR42_RS33645	0.14	+0.8
2,975,947	+		RR42_RS33645	0.47	+3.7
2,976,023	+		RR42_RS33645	0.59	-0.9
2,976,153	-		RR42_RS33645	0.79	-0.3
2,976,175	+		RR42_RS33645	0.82	-0.8
2,976,175	+		RR42_RS33645	0.82	-1.2
2,976,176	-		RR42_RS33645	0.82	+0.8
2,976,176	-		RR42_RS33645	0.82	+0.8
2,976,187	+		RR42_RS33645	0.84	+0.3
2,976,187	+		RR42_RS33645	0.84	+0.7
2,976,187	+		RR42_RS33645	0.84	-0.2