Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33635

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,971,363	+		RR42_RS33630	0.13	+0.5
2,971,363	+		RR42_RS33630	0.13	-1.4
2,971,363	+		RR42_RS33630	0.13	+0.1
2,971,363	+		RR42_RS33630	0.13	-0.1
2,971,364	-		RR42_RS33630	0.13	-0.7
2,971,422	-		RR42_RS33630	0.18	+1.5
2,971,422	-		RR42_RS33630	0.18	+0.0
2,971,523	+		RR42_RS33630	0.28	+0.6
2,971,523	+		RR42_RS33630	0.28	-0.4
2,971,524	-		RR42_RS33630	0.28	+2.3
2,971,555	+		RR42_RS33630	0.30	-0.3
2,971,607	+		RR42_RS33630	0.35	+0.5
2,971,607	+		RR42_RS33630	0.35	+0.2
2,971,607	+		RR42_RS33630	0.35	+0.2
2,971,607	+		RR42_RS33630	0.35	+0.7
2,971,608	-		RR42_RS33630	0.35	-0.4
2,971,608	-		RR42_RS33630	0.35	-1.0
2,971,608	-		RR42_RS33630	0.35	-0.3
2,971,609	+		RR42_RS33630	0.35	+0.7
2,971,665	+		RR42_RS33630	0.41	-1.3
2,971,732	+		RR42_RS33630	0.47	-0.4
2,971,732	+		RR42_RS33630	0.47	+1.2
2,971,732	+		RR42_RS33630	0.47	+0.6
2,971,733	-		RR42_RS33630	0.47	-0.6
2,971,733	-		RR42_RS33630	0.47	-0.8
2,971,733	-		RR42_RS33630	0.47	-1.3
2,971,837	+		RR42_RS33630	0.57	+0.9
2,971,837	+		RR42_RS33630	0.57	-0.7
2,971,838	-		RR42_RS33630	0.57	+0.0
2,971,886	-		RR42_RS33630	0.61	+0.5
2,971,917	-		RR42_RS33630	0.64	-0.4
2,971,942	+		RR42_RS33630	0.66	-1.7
2,971,975	+		RR42_RS33630	0.69	+0.4
2,972,074	+		RR42_RS33630	0.78	+0.6
2,972,143	+		RR42_RS33630	0.85	+0.1
2,972,143	+		RR42_RS33630	0.85	-0.8
2,972,143	+		RR42_RS33630	0.85	+0.5
2,972,144	-		RR42_RS33630	0.85	-0.3
2,972,144	-		RR42_RS33630	0.85	-0.5
2,972,144	-		RR42_RS33630	0.85	+0.6
2,972,144	-		RR42_RS33630	0.85	-1.4
2,972,306	-				+1.3
2,972,458	+		RR42_RS33635	0.16	-1.5
2,972,511	-		RR42_RS33635	0.24	-0.1
2,972,520	+		RR42_RS33635	0.25	-0.0
2,972,520	+		RR42_RS33635	0.25	-0.3
2,972,520	+		RR42_RS33635	0.25	+0.9
2,972,520	+		RR42_RS33635	0.25	+1.6
2,972,520	+		RR42_RS33635	0.25	-0.4
2,972,521	-		RR42_RS33635	0.25	+0.1
2,972,521	-		RR42_RS33635	0.25	+0.7
2,972,521	-		RR42_RS33635	0.25	-0.2
2,972,521	-		RR42_RS33635	0.25	-0.2
2,972,521	-		RR42_RS33635	0.25	+1.3
2,972,585	+		RR42_RS33635	0.34	-0.1
2,972,585	+		RR42_RS33635	0.34	-0.0
2,972,585	+		RR42_RS33635	0.34	-0.2
2,972,586	-		RR42_RS33635	0.34	-0.4
2,972,670	+		RR42_RS33635	0.47	+0.1
2,972,670	+		RR42_RS33635	0.47	-0.1
2,972,670	+		RR42_RS33635	0.47	+1.7
2,972,671	-		RR42_RS33635	0.47	-0.7
2,972,783	-		RR42_RS33635	0.63	-1.6
2,972,816	+		RR42_RS33635	0.68	+0.7
2,972,850	+		RR42_RS33635	0.73	+0.1
2,972,850	+		RR42_RS33635	0.73	+1.3
2,972,864	+		RR42_RS33635	0.75	-0.9
2,972,865	-		RR42_RS33635	0.75	+0.8
2,972,932	+		RR42_RS33635	0.85	+0.2
2,972,932	+		RR42_RS33635	0.85	-0.3
2,972,932	+		RR42_RS33635	0.85	+0.2
2,972,932	+		RR42_RS33635	0.85	-0.6
2,972,933	-		RR42_RS33635	0.85	-0.1
2,972,933	-		RR42_RS33635	0.85	+0.5
2,972,946	+		RR42_RS33635	0.87	-0.2
2,972,947	-		RR42_RS33635	0.87	-0.2
2,972,947	-		RR42_RS33635	0.87	+0.3
2,972,947	-		RR42_RS33635	0.87	-0.7
2,972,988	+				-1.2
2,972,988	+				+0.1
2,972,989	-				+0.2
2,973,009	-				-0.2
2,973,009	-				-0.3
2,973,234	-				-1.0
2,973,283	-				-1.2
2,973,288	+				-0.7
2,973,339	+				+0.6
2,973,340	-				-0.4
2,973,352	-				-0.9
2,973,352	-				-1.3
2,973,352	-				+0.4
2,973,401	+				-0.2
2,973,401	+				+0.4
2,973,402	-				+0.3
2,973,452	+				-0.0
2,973,474	-				+1.0
2,973,509	+				+0.4
2,973,527	+				-0.3
2,973,528	-				+1.4
2,973,604	+				+1.8
2,973,649	-				-0.1
2,973,791	+				+0.8
2,973,792	-				-0.2
2,973,792	-				+0.8
2,973,792	-				-1.0
2,973,792	-				+0.0
2,973,792	-				-1.6
2,973,793	+				+0.3
2,973,896	+				+1.3
2,973,979	+				-0.2
2,973,979	+				+0.7
2,973,979	+				-0.1
2,973,980	-				-0.6
2,973,980	-				-0.1